Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MTND1P11-201ENST00000456661 876 ntBASIC0.71□□□□□ -2.3
RFC3P40938 RPS27P22-201ENST00000478056 241 ntBASIC0.71□□□□□ -2.3
RFC3P40938 AC010598.1-201ENST00000510378 103 ntBASIC0.71□□□□□ -2.3
RFC3P40938 AC093303.1-201ENST00000514549 295 ntBASIC0.71□□□□□ -2.3
RFC3P40938 MIR6079-201ENST00000635807 62 ntBASIC0.71□□□□□ -2.3
RFC3P40938 AC099654.12-201ENST00000639868 649 ntBASIC0.71□□□□□ -2.3
RFC3P40938 Y_RNA.179-201ENST00000363844 90 ntBASIC0.7□□□□□ -2.3
RFC3P40938 RNU6-969P-201ENST00000383900 105 ntBASIC0.7□□□□□ -2.3
RFC3P40938 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
RFC3P40938 AL355796.1-201ENST00000406706 323 ntBASIC0.7□□□□□ -2.3
RFC3P40938 MTCO3P19-201ENST00000415864 321 ntBASIC0.7□□□□□ -2.3
RFC3P40938 CALM2P4-201ENST00000430810 426 ntBASIC0.7□□□□□ -2.3
RFC3P40938 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.7□□□□□ -2.3
RFC3P40938 RPL39P39-201ENST00000455840 151 ntBASIC0.7□□□□□ -2.3
RFC3P40938 RPL30P10-201ENST00000488148 337 ntBASIC0.7□□□□□ -2.3
RFC3P40938 RPS26P48-201ENST00000491713 339 ntBASIC0.7□□□□□ -2.3
RFC3P40938 AC010469.2-201ENST00000496412 480 ntBASIC0.7□□□□□ -2.3
RFC3P40938 TRBVA-201ENST00000498804 316 ntBASIC0.7□□□□□ -2.3
RFC3P40938 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.7□□□□□ -2.3
RFC3P40938 ACA59.1-201ENST00000515966 143 ntBASIC0.7□□□□□ -2.3
RFC3P40938 RNU6-947P-201ENST00000516264 106 ntBASIC0.7□□□□□ -2.3
RFC3P40938 Y_RNA.693-201ENST00000516641 110 ntBASIC0.7□□□□□ -2.3
RFC3P40938 RNU6-197P-201ENST00000516680 100 ntBASIC0.7□□□□□ -2.3
RFC3P40938 RNU7-28P-201ENST00000516759 62 ntBASIC0.7□□□□□ -2.3
RFC3P40938 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
RFC3P40938 AC023157.2-201ENST00000540596 141 ntBASIC0.7□□□□□ -2.3
RFC3P40938 UBL5P4-201ENST00000562584 236 ntBASIC0.7□□□□□ -2.3
RFC3P40938 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
RFC3P40938 PVT1_3.1-201ENST00000620853 95 ntBASIC0.7□□□□□ -2.3
RFC3P40938 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
RFC3P40938 MIR3974-201ENST00000637126 96 ntBASIC0.7□□□□□ -2.3
RFC3P40938 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
RFC3P40938 MTND5P26-201ENST00000426018 1752 ntBASIC0.7□□□□□ -2.3
RFC3P40938 AC008163.1-202ENST00000636004 2889 ntBASIC0.69□□□□□ -2.3
RFC3P40938 Y_RNA.184-201ENST00000363884 108 ntBASIC0.69□□□□□ -2.3
RFC3P40938 Y_RNA.265-201ENST00000364677 108 ntBASIC0.69□□□□□ -2.3
RFC3P40938 RNU6-1042P-201ENST00000384204 107 ntBASIC0.69□□□□□ -2.3
RFC3P40938 RNU6-1119P-201ENST00000384349 108 ntBASIC0.69□□□□□ -2.3
RFC3P40938 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
RFC3P40938 MIR598-201ENST00000384868 97 ntBASIC0.69□□□□□ -2.3
RFC3P40938 MIR517A-201ENST00000385001 87 ntBASIC0.69□□□□□ -2.3
RFC3P40938 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
RFC3P40938 U8.16-201ENST00000391279 133 ntBASIC0.69□□□□□ -2.3
RFC3P40938 MTCO3P40-201ENST00000392516 676 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
RFC3P40938 RPL30P16-201ENST00000419341 429 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.69□□□□□ -2.3
RFC3P40938 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.69□□□□□ -2.3
RFC3P40938 OR9P1P-201ENST00000496431 281 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
RFC3P40938 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
RFC3P40938 Y_RNA.665-201ENST00000516177 98 ntBASIC0.69□□□□□ -2.3
RFC3P40938 Y_RNA.670-201ENST00000516255 105 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AC010620.1-201ENST00000601088 1102 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AL138726.1-201ENST00000614873 333 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
RFC3P40938 AL359880.1-201ENST00000621879 266 ntBASIC0.69□□□□□ -2.3
RFC3P40938 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.69□□□□□ -2.3
RFC3P40938 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
RFC3P40938 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
RFC3P40938 Y_RNA.372-201ENST00000365599 102 ntBASIC0.68□□□□□ -2.3
RFC3P40938 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RFC3P40938 MIR562-201ENST00000384894 95 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.68□□□□□ -2.3
RFC3P40938 SEPT14P3-201ENST00000439401 183 ntBASIC0.68□□□□□ -2.3
RFC3P40938 MTCO3P18-201ENST00000440206 761 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AL732372.2-207ENST00000445840 183 ntBASIC0.68□□□□□ -2.3
RFC3P40938 MTCO2P7-201ENST00000446518 666 ntBASIC0.68□□□□□ -2.3
RFC3P40938 SEPT14P2-201ENST00000453405 183 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.68□□□□□ -2.3
RFC3P40938 SEPT14P4-201ENST00000513445 186 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC097462.1-201ENST00000514125 324 ntBASIC0.68□□□□□ -2.3
RFC3P40938 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC091144.1-201ENST00000519573 138 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC027419.1-201ENST00000522976 328 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC134698.4-201ENST00000523451 826 ntBASIC0.68□□□□□ -2.3
RFC3P40938 FO082796.1-201ENST00000523795 183 ntBASIC0.68□□□□□ -2.3
RFC3P40938 ZNF519P2-201ENST00000557032 169 ntBASIC0.68□□□□□ -2.3
RFC3P40938 MIR5696-201ENST00000578474 85 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AP000770.2-201ENST00000623694 100 ntBASIC0.68□□□□□ -2.3
RFC3P40938 AC124864.2-201ENST00000624736 186 ntBASIC0.68□□□□□ -2.3
RFC3P40938 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.68□□□□□ -2.3
RFC3P40938 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
RFC3P40938 Y_RNA.373-201ENST00000365600 103 ntBASIC0.67□□□□□ -2.3
RFC3P40938 MIR10B-201ENST00000385011 110 ntBASIC0.67□□□□□ -2.3
RFC3P40938 AL590632.1-201ENST00000424289 371 ntBASIC0.67□□□□□ -2.3
RFC3P40938 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
RFC3P40938 RNU6-405P-201ENST00000516637 110 ntBASIC0.67□□□□□ -2.3
RFC3P40938 RNU7-172P-201ENST00000517125 64 ntBASIC0.67□□□□□ -2.3
RFC3P40938 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.67□□□□□ -2.3
RFC3P40938 AC010525.2-201ENST00000590920 195 ntBASIC0.67□□□□□ -2.3
RFC3P40938 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
RFC3P40938 AC068790.6-201ENST00000602558 258 ntBASIC0.67□□□□□ -2.3
RFC3P40938 7SK.7-201ENST00000603504 247 ntBASIC0.67□□□□□ -2.3
RFC3P40938 RN7SKP299-201ENST00000606679 301 ntBASIC0.67□□□□□ -2.3
RFC3P40938 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms