Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Y_RNA.318-201ENST00000365131 97 ntBASIC1.02□□□□□ -2.25
RORAP35398 Y_RNA.516-201ENST00000384541 124 ntBASIC1.02□□□□□ -2.25
RORAP35398 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
RORAP35398 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RORAP35398 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.02□□□□□ -2.25
RORAP35398 MTND3P23-201ENST00000431980 347 ntBASIC1.02□□□□□ -2.25
RORAP35398 SNORD65B-201ENST00000459126 73 ntBASIC1.02□□□□□ -2.25
RORAP35398 RN7SKP88-201ENST00000516847 250 ntBASIC1.02□□□□□ -2.25
RORAP35398 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
RORAP35398 AC134698.4-201ENST00000523451 826 ntBASIC1.02□□□□□ -2.25
RORAP35398 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
RORAP35398 7SK.8-201ENST00000612110 250 ntBASIC1.02□□□□□ -2.25
RORAP35398 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.02□□□□□ -2.25
RORAP35398 7SK.11-201ENST00000615477 250 ntBASIC1.02□□□□□ -2.25
RORAP35398 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
RORAP35398 7SK.13-201ENST00000622040 250 ntBASIC1.02□□□□□ -2.25
RORAP35398 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RORAP35398 Y_RNA.48-201ENST00000362710 103 ntBASIC1.01□□□□□ -2.25
RORAP35398 RNU6-1266P-201ENST00000362794 105 ntBASIC1.01□□□□□ -2.25
RORAP35398 RNU5F-3P-201ENST00000363767 117 ntBASIC1.01□□□□□ -2.25
RORAP35398 Y_RNA.179-201ENST00000363844 90 ntBASIC1.01□□□□□ -2.25
RORAP35398 RNU6-440P-201ENST00000390882 105 ntBASIC1.01□□□□□ -2.25
RORAP35398 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
RORAP35398 AC245047.3-201ENST00000429428 127 ntBASIC1.01□□□□□ -2.25
RORAP35398 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.01□□□□□ -2.25
RORAP35398 AC092991.1-201ENST00000477176 376 ntBASIC1.01□□□□□ -2.25
RORAP35398 RNU7-99P-201ENST00000516271 62 ntBASIC1.01□□□□□ -2.25
RORAP35398 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
RORAP35398 AL137100.2-201ENST00000555786 315 ntBASIC1.01□□□□□ -2.25
RORAP35398 AC004584.2-201ENST00000570407 410 ntBASIC1.01□□□□□ -2.25
RORAP35398 AC093783.1-201ENST00000612976 329 ntBASIC1.01□□□□□ -2.25
RORAP35398 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RORAP35398 ZNF299P-201ENST00000406845 1804 ntBASIC1.01□□□□□ -2.25
RORAP35398 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
RORAP35398 RNU6-280P-201ENST00000364145 104 ntBASIC1□□□□□ -2.25
RORAP35398 Y_RNA.269-201ENST00000364685 89 ntBASIC1□□□□□ -2.25
RORAP35398 Y_RNA.295-201ENST00000364918 102 ntBASIC1□□□□□ -2.25
RORAP35398 RNU6-281P-201ENST00000384212 103 ntBASIC1□□□□□ -2.25
RORAP35398 RNU1-139P-201ENST00000391307 165 ntBASIC1□□□□□ -2.25
RORAP35398 MRPL42P3-201ENST00000401492 326 ntBASIC1□□□□□ -2.25
RORAP35398 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1□□□□□ -2.25
RORAP35398 RNU7-175P-201ENST00000515915 61 ntBASIC1□□□□□ -2.25
RORAP35398 RNU6-566P-201ENST00000516790 107 ntBASIC1□□□□□ -2.25
RORAP35398 CBX3P8-201ENST00000532412 525 ntBASIC1□□□□□ -2.25
RORAP35398 AC136932.1-201ENST00000574771 208 ntBASIC1□□□□□ -2.25
RORAP35398 7SK.7-201ENST00000603504 247 ntBASIC1□□□□□ -2.25
RORAP35398 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
RORAP35398 AC090517.2-201ENST00000614966 680 ntBASIC1□□□□□ -2.25
RORAP35398 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.99□□□□□ -2.25
RORAP35398 RNU4-12P-201ENST00000365233 139 ntBASIC0.99□□□□□ -2.25
RORAP35398 Y_RNA.473-201ENST00000384333 102 ntBASIC0.99□□□□□ -2.25
RORAP35398 RNU6-505P-201ENST00000384427 107 ntBASIC0.99□□□□□ -2.25
RORAP35398 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.99□□□□□ -2.25
RORAP35398 MRPS10P1-201ENST00000448483 130 ntBASIC0.99□□□□□ -2.25
RORAP35398 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.99□□□□□ -2.25
RORAP35398 SNORD5.1-201ENST00000458800 75 ntBASIC0.99□□□□□ -2.25
RORAP35398 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
RORAP35398 AC105313.1-201ENST00000509121 353 ntBASIC0.99□□□□□ -2.25
RORAP35398 RNU6-1114P-201ENST00000516022 107 ntBASIC0.99□□□□□ -2.25
RORAP35398 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.99□□□□□ -2.25
RORAP35398 AC023157.2-201ENST00000540596 141 ntBASIC0.99□□□□□ -2.25
RORAP35398 MIR5701-3-201ENST00000578890 82 ntBASIC0.99□□□□□ -2.25
RORAP35398 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.99□□□□□ -2.25
RORAP35398 MIR4273-201ENST00000582824 84 ntBASIC0.99□□□□□ -2.25
RORAP35398 SNORA4-201ENST00000584302 138 ntBASIC0.99□□□□□ -2.25
RORAP35398 MIR5701-1-201ENST00000585138 82 ntBASIC0.99□□□□□ -2.25
RORAP35398 AC125232.2-201ENST00000592457 143 ntBASIC0.99□□□□□ -2.25
RORAP35398 AC012557.2-201ENST00000605919 418 ntBASIC0.99□□□□□ -2.25
RORAP35398 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
RORAP35398 AC010999.1-201ENST00000611856 324 ntBASIC0.99□□□□□ -2.25
RORAP35398 MIR5701-2-201ENST00000615634 82 ntBASIC0.99□□□□□ -2.25
RORAP35398 MIR3688-2-201ENST00000636963 87 ntBASIC0.99□□□□□ -2.25
RORAP35398 AC068647.2-201ENST00000637380 353 ntBASIC0.99□□□□□ -2.25
RORAP35398 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RORAP35398 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RORAP35398 RNU6-623P-201ENST00000363143 105 ntBASIC0.98□□□□□ -2.25
RORAP35398 Y_RNA.157-201ENST00000363638 102 ntBASIC0.98□□□□□ -2.25
RORAP35398 RNY1P14-201ENST00000384426 108 ntBASIC0.98□□□□□ -2.25
RORAP35398 SNORD116-4-201ENST00000384733 96 ntBASIC0.98□□□□□ -2.25
RORAP35398 MIR520E-201ENST00000384867 87 ntBASIC0.98□□□□□ -2.25
RORAP35398 AL355796.1-201ENST00000406706 323 ntBASIC0.98□□□□□ -2.25
RORAP35398 RPL39P38-201ENST00000467018 153 ntBASIC0.98□□□□□ -2.25
RORAP35398 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
RORAP35398 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
RORAP35398 RNU4-49P-201ENST00000516080 140 ntBASIC0.98□□□□□ -2.25
RORAP35398 AC027419.1-201ENST00000522976 328 ntBASIC0.98□□□□□ -2.25
RORAP35398 APOOP3-201ENST00000536787 586 ntBASIC0.98□□□□□ -2.25
RORAP35398 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.98□□□□□ -2.25
RORAP35398 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.98□□□□□ -2.25
RORAP35398 MIR4438-201ENST00000585271 93 ntBASIC0.98□□□□□ -2.25
RORAP35398 AL357075.2-201ENST00000614906 189 ntBASIC0.98□□□□□ -2.25
RORAP35398 MIR6128-201ENST00000615528 109 ntBASIC0.98□□□□□ -2.25
RORAP35398 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.98□□□□□ -2.25
RORAP35398 MIR3662-201ENST00000637030 95 ntBASIC0.98□□□□□ -2.25
RORAP35398 RNU6-874P-201ENST00000362390 105 ntBASIC0.97□□□□□ -2.25
RORAP35398 Y_RNA.106-201ENST00000363189 100 ntBASIC0.97□□□□□ -2.25
RORAP35398 Y_RNA.490-201ENST00000384413 102 ntBASIC0.97□□□□□ -2.25
RORAP35398 SNORD115-47-201ENST00000391226 86 ntBASIC0.97□□□□□ -2.25
RORAP35398 RNA5SP118-201ENST00000410385 109 ntBASIC0.97□□□□□ -2.25
RORAP35398 RNU6-1001P-201ENST00000411265 100 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms