Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SNORD45.3-201ENST00000363836 72 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 AC117470.1-201ENST00000381974 330 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 MIR15B-201ENST00000385045 98 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 RNU6-747P-201ENST00000390928 104 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 RNU6-241P-201ENST00000391148 104 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 MTND3P9-201ENST00000429526 346 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 AC005042.3-201ENST00000453230 174 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 snoU13.18-201ENST00000459483 104 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 AC010598.1-201ENST00000510378 103 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 AL358944.1-201ENST00000528537 144 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 FGF7P1-201ENST00000582820 288 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 AC005771.1-201ENST00000585581 349 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 AC020891.4-201ENST00000605745 93 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 MTND4P9-201ENST00000507819 1346 ntBASIC-0.49□□□□□ -2.49
CKS2P33552 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 AL049545.1-201ENST00000401856 572 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.5□□□□□ -2.49
CKS2P33552 SNORD123-201ENST00000459473 70 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 AC104692.1-201ENST00000472406 90 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 AC016550.1-201ENST00000505348 785 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 RNU6-63P-201ENST00000516690 95 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 AC090897.1-201ENST00000580909 226 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 AC005176.2-201ENST00000596933 147 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.5□□□□□ -2.49
CKS2P33552 AC099654.13-201ENST00000639774 207 ntBASIC-0.5□□□□□ -2.49
CKS2P33552 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 RNU4-92P-201ENST00000363783 136 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 SNORA2A-201ENST00000383885 135 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 SNORD73A-201ENST00000386062 65 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 MIR454-201ENST00000390180 115 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.51□□□□□ -2.49
CKS2P33552 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.51□□□□□ -2.49
CKS2P33552 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.51□□□□□ -2.49
CKS2P33552 AC069271.1-201ENST00000445577 156 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 MTND4P18-201ENST00000447010 465 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.51□□□□□ -2.49
CKS2P33552 SNORD4A-201ENST00000459174 72 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.51□□□□□ -2.49
CKS2P33552 SNORD27.1-201ENST00000516319 72 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.51□□□□□ -2.49
CKS2P33552 AL355375.2-201ENST00000574825 175 ntBASIC-0.51□□□□□ -2.49
CKS2P33552 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CKS2P33552 MIR330-201ENST00000362196 94 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 RNU6-396P-201ENST00000365369 105 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 RNY1P14-201ENST00000384426 108 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 MIR598-201ENST00000384868 97 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 MT-TN-201ENST00000387400 73 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.52□□□□□ -2.49
CKS2P33552 MTCO2P21-201ENST00000419780 677 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 AC104850.1-201ENST00000435940 476 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 SUMO1P2-201ENST00000452524 304 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 RPL17P19-201ENST00000489069 552 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.52□□□□□ -2.49
CKS2P33552 RNU4-49P-201ENST00000516080 140 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 MTND1P8-201ENST00000571424 950 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 AC008608.1-201ENST00000603910 127 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.52□□□□□ -2.49
CKS2P33552 AC009878.1-201ENST00000621819 340 ntBASIC-0.52□□□□□ -2.49
CKS2P33552 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.52□□□□□ -2.49
CKS2P33552 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.53□□□□□ -2.49
CKS2P33552 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.53□□□□□ -2.49
CKS2P33552 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU6-157P-201ENST00000383957 107 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU6-74P-201ENST00000384235 107 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU6-925P-201ENST00000384629 104 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU6-376P-201ENST00000384731 106 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 AL606489.2-201ENST00000433886 234 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 MTND1P26-201ENST00000440488 538 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 AL359672.1-201ENST00000442302 409 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.53□□□□□ -2.49
CKS2P33552 SCARNA18-201ENST00000459004 134 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU7-129P-201ENST00000516128 62 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNA5SP54-201ENST00000516951 92 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 RNU6-410P-201ENST00000517006 107 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 AC133485.4-201ENST00000561835 220 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 AC091304.9-201ENST00000612091 226 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 AL607023.1-201ENST00000620045 248 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.53□□□□□ -2.49
CKS2P33552 SNORD68-201ENST00000363214 84 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 SNORD115-8-201ENST00000363856 82 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 U8.5-201ENST00000364528 136 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 SNORD115-38-201ENST00000365037 82 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 MIR214-201ENST00000385214 110 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CKS2P33552 MIR892B-201ENST00000401279 77 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 RPS29P15-201ENST00000458329 171 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 RNU7-159P-201ENST00000459284 62 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 MTND1P35-201ENST00000526739 508 ntBASIC-0.54□□□□□ -2.5
CKS2P33552 MIR4703-201ENST00000577728 79 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms