Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.82□□□□□ -2.12
CHMP24386 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CHMP24386 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CHMP24386 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
CHMP24386 JTBP1-201ENST00000441314 247 ntBASIC1.82□□□□□ -2.12
CHMP24386 MRPS10P1-201ENST00000448483 130 ntBASIC1.82□□□□□ -2.12
CHMP24386 snoU13.9-201ENST00000458927 103 ntBASIC1.82□□□□□ -2.12
CHMP24386 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.82□□□□□ -2.12
CHMP24386 MIR4709-201ENST00000577272 72 ntBASIC1.82□□□□□ -2.12
CHMP24386 MIR7843-201ENST00000622274 79 ntBASIC1.82□□□□□ -2.12
CHMP24386 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CHMP24386 Y_RNA.146-201ENST00000363549 102 ntBASIC1.81□□□□□ -2.12
CHMP24386 Y_RNA.187-201ENST00000363918 113 ntBASIC1.81□□□□□ -2.12
CHMP24386 SNORA20B-201ENST00000384220 132 ntBASIC1.81□□□□□ -2.12
CHMP24386 RNU2-2P-201ENST00000410396 191 ntBASIC1.81□□□□□ -2.12
CHMP24386 MTND4LP11-201ENST00000422184 280 ntBASIC1.81□□□□□ -2.12
CHMP24386 AC096644.2-201ENST00000429278 159 ntBASIC1.81□□□□□ -2.12
CHMP24386 MTATP6P23-201ENST00000440153 476 ntBASIC1.81□□□□□ -2.12
CHMP24386 AL606517.2-201ENST00000442855 241 ntBASIC1.81□□□□□ -2.12
CHMP24386 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
CHMP24386 MTND3P22-201ENST00000510932 243 ntBASIC1.81□□□□□ -2.12
CHMP24386 RNU6-408P-201ENST00000515910 100 ntBASIC1.81□□□□□ -2.12
CHMP24386 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.81□□□□□ -2.12
CHMP24386 AP002001.1-203ENST00000534002 267 ntBASIC1.81□□□□□ -2.12
CHMP24386 DEFB122-202ENST00000569013 197 ntBASIC1.81□□□□□ -2.12
CHMP24386 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
CHMP24386 U2.1-201ENST00000618978 145 ntBASIC1.81□□□□□ -2.12
CHMP24386 AC006435.5-201ENST00000624486 112 ntBASIC1.81□□□□□ -2.12
CHMP24386 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
CHMP24386 RNU6-407P-201ENST00000365280 104 ntBASIC1.8□□□□□ -2.12
CHMP24386 Y_RNA.428-201ENST00000384078 102 ntBASIC1.8□□□□□ -2.12
CHMP24386 RPL21P1-201ENST00000399532 476 ntBASIC1.8□□□□□ -2.12
CHMP24386 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
CHMP24386 AL355796.1-201ENST00000406706 323 ntBASIC1.8□□□□□ -2.12
CHMP24386 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.8□□□□□ -2.12
CHMP24386 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.8□□□□□ -2.12
CHMP24386 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
CHMP24386 RNU7-152P-201ENST00000458982 64 ntBASIC1.8□□□□□ -2.12
CHMP24386 RPS26P45-201ENST00000471748 340 ntBASIC1.8□□□□□ -2.12
CHMP24386 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
CHMP24386 RNU7-128P-201ENST00000517247 62 ntBASIC1.8□□□□□ -2.12
CHMP24386 AL442163.3-201ENST00000554110 156 ntBASIC1.8□□□□□ -2.12
CHMP24386 MIR3684-201ENST00000579779 74 ntBASIC1.8□□□□□ -2.12
CHMP24386 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
CHMP24386 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CHMP24386 RNU4-73P-201ENST00000363164 141 ntBASIC1.79□□□□□ -2.12
CHMP24386 MT-TD-201ENST00000387419 68 ntBASIC1.79□□□□□ -2.12
CHMP24386 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.79□□□□□ -2.12
CHMP24386 Y_RNA.661-201ENST00000516003 99 ntBASIC1.79□□□□□ -2.12
CHMP24386 Y_RNA.675-201ENST00000516389 149 ntBASIC1.79□□□□□ -2.12
CHMP24386 SNORD116.3-201ENST00000517176 78 ntBASIC1.79□□□□□ -2.12
CHMP24386 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.79□□□□□ -2.12
CHMP24386 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.79□□□□□ -2.12
CHMP24386 MIR4795-201ENST00000584182 89 ntBASIC1.79□□□□□ -2.12
CHMP24386 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
CHMP24386 MIR8063-201ENST00000621930 81 ntBASIC1.79□□□□□ -2.12
CHMP24386 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.79□□□□□ -2.12
CHMP24386 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CHMP24386 MIR410-201ENST00000362222 80 ntBASIC1.78□□□□□ -2.12
CHMP24386 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
CHMP24386 RNU6-1310P-201ENST00000384153 107 ntBASIC1.78□□□□□ -2.12
CHMP24386 Y_RNA.463-201ENST00000384271 102 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC010154.1-201ENST00000425857 269 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC245047.3-201ENST00000429428 127 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
CHMP24386 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
CHMP24386 FCF1P4-201ENST00000448326 183 ntBASIC1.78□□□□□ -2.12
CHMP24386 RPS27P1-201ENST00000450552 247 ntBASIC1.78□□□□□ -2.12
CHMP24386 snoU13.23-201ENST00000458863 104 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC027575.1-201ENST00000481064 460 ntBASIC1.78□□□□□ -2.12
CHMP24386 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.78□□□□□ -2.12
CHMP24386 HSBP1P1-201ENST00000555205 166 ntBASIC1.78□□□□□ -2.12
CHMP24386 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
CHMP24386 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
CHMP24386 AL929325.1-201ENST00000603096 117 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC073413.2-201ENST00000604332 360 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC022217.4-201ENST00000604389 163 ntBASIC1.78□□□□□ -2.12
CHMP24386 AC095038.3-201ENST00000634439 195 ntBASIC1.78□□□□□ -2.12
CHMP24386 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHMP24386 RNU6-454P-201ENST00000364292 107 ntBASIC1.77□□□□□ -2.13
CHMP24386 RNU6-338P-201ENST00000383888 105 ntBASIC1.77□□□□□ -2.13
CHMP24386 RNU6-203P-201ENST00000384038 104 ntBASIC1.77□□□□□ -2.13
CHMP24386 RNY3P4-201ENST00000384428 101 ntBASIC1.77□□□□□ -2.13
CHMP24386 RNU6-950P-201ENST00000384651 107 ntBASIC1.77□□□□□ -2.13
CHMP24386 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
CHMP24386 SNORD78.2-201ENST00000391076 69 ntBASIC1.77□□□□□ -2.13
CHMP24386 AC018865.2-201ENST00000423631 129 ntBASIC1.77□□□□□ -2.13
CHMP24386 RNU7-172P-201ENST00000517125 64 ntBASIC1.77□□□□□ -2.13
CHMP24386 AC023442.1-201ENST00000531247 422 ntBASIC1.77□□□□□ -2.13
CHMP24386 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
CHMP24386 AC006600.1-201ENST00000572529 153 ntBASIC1.77□□□□□ -2.13
CHMP24386 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
CHMP24386 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.77□□□□□ -2.13
CHMP24386 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
CHMP24386 U6.115-201ENST00000636045 103 ntBASIC1.77□□□□□ -2.13
CHMP24386 ICE2P2-201ENST00000483823 2787 ntBASIC1.77□□□□□ -2.13
CHMP24386 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CHMP24386 RNU6-271P-201ENST00000363858 105 ntBASIC1.76□□□□□ -2.13
CHMP24386 RNU6-961P-201ENST00000363893 105 ntBASIC1.76□□□□□ -2.13
CHMP24386 SNORA26.9-201ENST00000391322 122 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms