Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 Y_RNA.435-201ENST00000384095 112 ntBASIC2.86□□□□□ -1.95
ATF4P18848 RNU6-209P-201ENST00000384118 107 ntBASIC2.86□□□□□ -1.95
ATF4P18848 AL512604.1-201ENST00000404812 257 ntBASIC2.86□□□□□ -1.95
ATF4P18848 Y_RNA.621-201ENST00000411065 96 ntBASIC2.86□□□□□ -1.95
ATF4P18848 NDUFB1P1-201ENST00000435191 180 ntBASIC2.86□□□□□ -1.95
ATF4P18848 RNU1-45P-201ENST00000517191 141 ntBASIC2.86□□□□□ -1.95
ATF4P18848 RNU7-128P-201ENST00000517247 62 ntBASIC2.86□□□□□ -1.95
ATF4P18848 MIR4308-201ENST00000580634 81 ntBASIC2.86□□□□□ -1.95
ATF4P18848 MIR3944-201ENST00000581277 108 ntBASIC2.86□□□□□ -1.95
ATF4P18848 MIR2681-201ENST00000581814 105 ntBASIC2.86□□□□□ -1.95
ATF4P18848 AC069114.2-201ENST00000604699 304 ntBASIC2.86□□□□□ -1.95
ATF4P18848 AC093732.2-201ENST00000607950 274 ntBASIC2.86□□□□□ -1.95
ATF4P18848 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.86□□□□□ -1.95
ATF4P18848 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ATF4P18848 ZNF271P-202ENST00000465539 1970 ntBASIC2.86□□□□□ -1.95
ATF4P18848 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.86□□□□□ -1.95
ATF4P18848 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.86□□□□□ -1.95
ATF4P18848 AC068647.1-201ENST00000489539 2265 ntBASIC2.86□□□□□ -1.95
ATF4P18848 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATF4P18848 AC131280.1-202ENST00000624067 4211 ntBASIC2.85□□□□□ -1.95
ATF4P18848 RNU6-674P-201ENST00000363831 107 ntBASIC2.85□□□□□ -1.95
ATF4P18848 RNA5SP42-201ENST00000364278 115 ntBASIC2.85□□□□□ -1.95
ATF4P18848 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ATF4P18848 Y_RNA.555-201ENST00000384673 110 ntBASIC2.85□□□□□ -1.95
ATF4P18848 MIR597-201ENST00000384968 97 ntBASIC2.85□□□□□ -1.95
ATF4P18848 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.85□□□□□ -1.95
ATF4P18848 AC007064.1-201ENST00000412238 351 ntBASIC2.85□□□□□ -1.95
ATF4P18848 RPS29P7-201ENST00000439662 171 ntBASIC2.85□□□□□ -1.95
ATF4P18848 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.85□□□□□ -1.95
ATF4P18848 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.85□□□□□ -1.95
ATF4P18848 AC233266.1-201ENST00000454518 96 ntBASIC2.85□□□□□ -1.95
ATF4P18848 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.85□□□□□ -1.95
ATF4P18848 AC091021.1-201ENST00000468051 388 ntBASIC2.85□□□□□ -1.95
ATF4P18848 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.85□□□□□ -1.95
ATF4P18848 AL163195.1-201ENST00000496941 348 ntBASIC2.85□□□□□ -1.95
ATF4P18848 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.85□□□□□ -1.95
ATF4P18848 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.85□□□□□ -1.95
ATF4P18848 AC242852.1-201ENST00000612151 96 ntBASIC2.85□□□□□ -1.95
ATF4P18848 AC244015.1-201ENST00000622301 99 ntBASIC2.85□□□□□ -1.95
ATF4P18848 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
ATF4P18848 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.84□□□□□ -1.95
ATF4P18848 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.95
ATF4P18848 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATF4P18848 Y_RNA.121-201ENST00000363309 113 ntBASIC2.84□□□□□ -1.95
ATF4P18848 RNU6-103P-201ENST00000363686 107 ntBASIC2.84□□□□□ -1.95
ATF4P18848 Y_RNA.238-201ENST00000364441 102 ntBASIC2.84□□□□□ -1.95
ATF4P18848 Y_RNA.267-201ENST00000364679 109 ntBASIC2.84□□□□□ -1.95
ATF4P18848 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATF4P18848 RNU6-969P-201ENST00000383900 105 ntBASIC2.84□□□□□ -1.95
ATF4P18848 Y_RNA.571-201ENST00000384753 98 ntBASIC2.84□□□□□ -1.95
ATF4P18848 HMGN2P3-201ENST00000433603 273 ntBASIC2.84□□□□□ -1.95
ATF4P18848 AC099677.2-201ENST00000436385 175 ntBASIC2.84□□□□□ -1.95
ATF4P18848 HMGN2P5-201ENST00000436882 273 ntBASIC2.84□□□□□ -1.95
ATF4P18848 AC069257.2-201ENST00000441819 155 ntBASIC2.84□□□□□ -1.95
ATF4P18848 RPS26P45-201ENST00000471748 340 ntBASIC2.84□□□□□ -1.95
ATF4P18848 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.84□□□□□ -1.95
ATF4P18848 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.84□□□□□ -1.95
ATF4P18848 RNU6-341P-201ENST00000516973 96 ntBASIC2.84□□□□□ -1.95
ATF4P18848 SNORA62.6-201ENST00000606322 83 ntBASIC2.84□□□□□ -1.95
ATF4P18848 AC039056.2-201ENST00000622261 511 ntBASIC2.84□□□□□ -1.95
ATF4P18848 U6.108-201ENST00000637764 58 ntBASIC2.84□□□□□ -1.95
ATF4P18848 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ATF4P18848 AC100821.1-201ENST00000523153 2479 ntBASIC2.84□□□□□ -1.96
ATF4P18848 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
ATF4P18848 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.96
ATF4P18848 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.84□□□□□ -1.96
ATF4P18848 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATF4P18848 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
ATF4P18848 SNORA33-201ENST00000363664 130 ntBASIC2.83□□□□□ -1.96
ATF4P18848 RNU6-1019P-201ENST00000364424 107 ntBASIC2.83□□□□□ -1.96
ATF4P18848 RNU4-41P-201ENST00000364426 143 ntBASIC2.83□□□□□ -1.96
ATF4P18848 MIR7-3-201ENST00000384898 110 ntBASIC2.83□□□□□ -1.96
ATF4P18848 RPL32P35-201ENST00000415214 394 ntBASIC2.83□□□□□ -1.96
ATF4P18848 AC063976.3-201ENST00000426849 329 ntBASIC2.83□□□□□ -1.96
ATF4P18848 SUMO1P4-201ENST00000429430 302 ntBASIC2.83□□□□□ -1.96
ATF4P18848 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.83□□□□□ -1.96
ATF4P18848 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
ATF4P18848 AC023449.1-201ENST00000454464 154 ntBASIC2.83□□□□□ -1.96
ATF4P18848 Y_RNA.662-201ENST00000516028 97 ntBASIC2.83□□□□□ -1.96
ATF4P18848 MIR4529-201ENST00000578110 78 ntBASIC2.83□□□□□ -1.96
ATF4P18848 AC091178.2-201ENST00000584401 117 ntBASIC2.83□□□□□ -1.96
ATF4P18848 AP000553.6-201ENST00000641242 118 ntBASIC2.83□□□□□ -1.96
ATF4P18848 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATF4P18848 SNORD9-201ENST00000362566 104 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNU1-51P-201ENST00000365345 176 ntBASIC2.82□□□□□ -1.96
ATF4P18848 MIR524-201ENST00000385242 87 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNA5SP171-201ENST00000391071 115 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNA5SP496-201ENST00000391240 109 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNU6-381P-201ENST00000391259 108 ntBASIC2.82□□□□□ -1.96
ATF4P18848 MIR1283-2-201ENST00000408621 87 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNU2-2P-201ENST00000410396 191 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNU6-383P-201ENST00000410864 94 ntBASIC2.82□□□□□ -1.96
ATF4P18848 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ATF4P18848 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RN7SL323P-201ENST00000494712 295 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNA5SP217-201ENST00000515959 91 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNU6-861P-201ENST00000516745 106 ntBASIC2.82□□□□□ -1.96
ATF4P18848 AC026403.1-201ENST00000518938 295 ntBASIC2.82□□□□□ -1.96
ATF4P18848 AC022559.1-201ENST00000520905 205 ntBASIC2.82□□□□□ -1.96
ATF4P18848 AL358944.1-201ENST00000528537 144 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms