Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SNORD95.1-201ENST00000364099 68 ntBASIC-0.06□□□□□ -2.42
FREM3P0C091 RNU4-68P-201ENST00000364314 141 ntBASIC-0.06□□□□□ -2.42
FREM3P0C091 RNU7-128P-201ENST00000517247 62 ntBASIC-0.06□□□□□ -2.42
FREM3P0C091 AL096861.1-201ENST00000610899 123 ntBASIC-0.06□□□□□ -2.42
FREM3P0C091 RNU6-654P-201ENST00000364373 107 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 RNU6-302P-201ENST00000365249 107 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 SNORA2.2-201ENST00000365473 135 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 RNU6-83P-201ENST00000384568 112 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 SNORA8.3-201ENST00000384679 139 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 MIR214-201ENST00000385214 110 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 CALM2P3-201ENST00000400429 449 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.07□□□□□ -2.42
FREM3P0C091 MTND1P4-201ENST00000435196 415 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.07□□□□□ -2.42
FREM3P0C091 SNORA25.12-201ENST00000516202 82 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 RNU6-58P-201ENST00000517143 103 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 MIR4493-201ENST00000584016 73 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 MIR3192-201ENST00000584920 77 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AC069431.2-201ENST00000604149 1099 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AC096720.1-201ENST00000604441 183 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AL139418.1-201ENST00000613613 177 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 SNORD114-15-201ENST00000364687 72 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 RNU6-177P-201ENST00000411257 104 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.07□□□□□ -2.42
FREM3P0C091 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.07□□□□□ -2.42
FREM3P0C091 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.07□□□□□ -2.42
FREM3P0C091 PIGPP3-201ENST00000425307 415 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.07□□□□□ -2.42
FREM3P0C091 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.07□□□□□ -2.42
FREM3P0C091 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.07□□□□□ -2.42
FREM3P0C091 RN7SKP12-201ENST00000516275 143 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AP003716.2-201ENST00000528260 108 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.07□□□□□ -2.42
FREM3P0C091 HIF1AP1-201ENST00000553642 175 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 BNIP3P39-201ENST00000601077 554 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AC006504.8-201ENST00000621046 635 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 AC027279.3-201ENST00000625055 122 ntBASIC-0.07□□□□□ -2.42
FREM3P0C091 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AC018865.2-201ENST00000423631 129 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 MTND1P20-201ENST00000430341 950 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 SEPT7P4-201ENST00000437076 306 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.08□□□□□ -2.42
FREM3P0C091 AC091951.3-201ENST00000504093 246 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 MTND2P31-201ENST00000512602 616 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.08□□□□□ -2.42
FREM3P0C091 MTND1P35-201ENST00000526739 508 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AC104383.1-201ENST00000530297 370 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AC025449.1-201ENST00000603896 529 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AP000240.1-201ENST00000609910 452 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AC016597.2-201ENST00000613256 341 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 U6.73-201ENST00000619194 103 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AC078938.1-201ENST00000620993 318 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 SCARNA4-201ENST00000629045 128 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 RNA5SP48-201ENST00000363969 126 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 RNU6-514P-201ENST00000384208 107 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 RNA5SP25-201ENST00000410815 110 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AL365184.2-201ENST00000431139 435 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 Vault.3-201ENST00000516676 95 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
FREM3P0C091 AC108676.2-201ENST00000605225 163 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 AC008873.1-201ENST00000625051 138 ntBASIC-0.08□□□□□ -2.42
FREM3P0C091 SNORA32.3-201ENST00000384772 121 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 USP9YP29-201ENST00000445112 563 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 SNRPGP12-201ENST00000449481 213 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 AC007215.1-201ENST00000464893 276 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.09□□□□□ -2.42
FREM3P0C091 AC114811.1-201ENST00000507207 168 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 RN7SKP164-201ENST00000516138 266 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 RNU1-117P-201ENST00000517041 158 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 MTND2P32-201ENST00000521584 1038 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 AC010525.2-201ENST00000590920 195 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 RAC1P9-201ENST00000604990 392 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 SNORD11B-201ENST00000607707 90 ntBASIC-0.09□□□□□ -2.42
FREM3P0C091 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.09□□□□□ -2.42
FREM3P0C091 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 RNU6-931P-201ENST00000363850 107 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 RNU6-396P-201ENST00000365369 105 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 RNA5SP494-201ENST00000410653 129 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 AL593851.1-201ENST00000426171 157 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.1□□□□□ -2.42
FREM3P0C091 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 MTATP6P9-201ENST00000515039 680 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 RNU7-41P-201ENST00000515917 61 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 RNU2-69P-201ENST00000516061 100 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 RNU6-612P-201ENST00000516909 102 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 AL358944.1-201ENST00000528537 144 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.1□□□□□ -2.42
FREM3P0C091 AL133173.2-201ENST00000614270 90 ntBASIC-0.1□□□□□ -2.42
FREM3P0C091 MIR1-1-201ENST00000362147 71 ntBASIC-0.1□□□□□ -2.43
FREM3P0C091 MIR1302-7-201ENST00000408841 72 ntBASIC-0.1□□□□□ -2.43
FREM3P0C091 RNU6-195P-201ENST00000411352 109 ntBASIC-0.1□□□□□ -2.43
FREM3P0C091 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.1□□□□□ -2.43
FREM3P0C091 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.1□□□□□ -2.43
FREM3P0C091 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.1□□□□□ -2.43
FREM3P0C091 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.1□□□□□ -2.43
FREM3P0C091 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms