Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
RHOP08100 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
RHOP08100 Y_RNA.626-201ENST00000411288 95 ntBASIC2.56□□□□□ -2
RHOP08100 PIGPP3-201ENST00000425307 415 ntBASIC2.56□□□□□ -2
RHOP08100 SUMO1P2-201ENST00000452524 304 ntBASIC2.56□□□□□ -2
RHOP08100 UBL5P3-201ENST00000475112 231 ntBASIC2.56□□□□□ -2
RHOP08100 RPS27AP9-201ENST00000477681 438 ntBASIC2.56□□□□□ -2
RHOP08100 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
RHOP08100 SNORD116-28-201ENST00000516123 91 ntBASIC2.56□□□□□ -2
RHOP08100 AC021269.2-201ENST00000532318 330 ntBASIC2.56□□□□□ -2
RHOP08100 MIR3145-201ENST00000580727 82 ntBASIC2.56□□□□□ -2
RHOP08100 Z83818.1-201ENST00000603584 150 ntBASIC2.56□□□□□ -2
RHOP08100 AC004792.1-201ENST00000614523 137 ntBASIC2.56□□□□□ -2
RHOP08100 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
RHOP08100 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
RHOP08100 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
RHOP08100 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
RHOP08100 RNU6-1305P-201ENST00000364353 104 ntBASIC2.55□□□□□ -2
RHOP08100 Y_RNA.329-201ENST00000365209 107 ntBASIC2.55□□□□□ -2
RHOP08100 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.55□□□□□ -2
RHOP08100 MIR218-1-201ENST00000384999 110 ntBASIC2.55□□□□□ -2
RHOP08100 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
RHOP08100 RN7SKP223-201ENST00000410582 62 ntBASIC2.55□□□□□ -2
RHOP08100 RNU6-651P-201ENST00000411040 105 ntBASIC2.55□□□□□ -2
RHOP08100 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.55□□□□□ -2
RHOP08100 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.55□□□□□ -2
RHOP08100 Y_RNA.644-201ENST00000459006 113 ntBASIC2.55□□□□□ -2
RHOP08100 Y_RNA.638-201ENST00000459374 113 ntBASIC2.55□□□□□ -2
RHOP08100 snoU13.15-201ENST00000459407 104 ntBASIC2.55□□□□□ -2
RHOP08100 AC023141.11-201ENST00000508864 202 ntBASIC2.55□□□□□ -2
RHOP08100 Y_RNA.674-201ENST00000516362 113 ntBASIC2.55□□□□□ -2
RHOP08100 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.55□□□□□ -2
RHOP08100 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RHOP08100 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
RHOP08100 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RHOP08100 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.55□□□□□ -2
RHOP08100 AC073349.3-201ENST00000617616 186 ntBASIC2.55□□□□□ -2
RHOP08100 RNU6-1272P-201ENST00000362776 107 ntBASIC2.54□□□□□ -2
RHOP08100 SNORD31B-201ENST00000364977 69 ntBASIC2.54□□□□□ -2
RHOP08100 RNU6-662P-201ENST00000384253 104 ntBASIC2.54□□□□□ -2
RHOP08100 AL031003.1-201ENST00000404229 172 ntBASIC2.54□□□□□ -2
RHOP08100 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
RHOP08100 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
RHOP08100 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
RHOP08100 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
RHOP08100 AC024067.1-201ENST00000426199 223 ntBASIC2.54□□□□□ -2
RHOP08100 AL356320.1-201ENST00000429616 163 ntBASIC2.54□□□□□ -2
RHOP08100 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.54□□□□□ -2
RHOP08100 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
RHOP08100 Y_RNA.679-201ENST00000516416 91 ntBASIC2.54□□□□□ -2
RHOP08100 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
RHOP08100 SNORA48.11-201ENST00000517015 89 ntBASIC2.54□□□□□ -2
RHOP08100 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
RHOP08100 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.54□□□□□ -2
RHOP08100 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
RHOP08100 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
RHOP08100 MIR5739-201ENST00000619803 80 ntBASIC2.54□□□□□ -2
RHOP08100 MIR7843-201ENST00000622274 79 ntBASIC2.54□□□□□ -2
RHOP08100 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RHOP08100 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
RHOP08100 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.53□□□□□ -2
RHOP08100 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RHOP08100 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2
RHOP08100 SNORD114-7-201ENST00000362520 77 ntBASIC2.53□□□□□ -2
RHOP08100 Y_RNA.793-201ENST00000411222 111 ntBASIC2.53□□□□□ -2
RHOP08100 AC074290.1-201ENST00000448883 135 ntBASIC2.53□□□□□ -2
RHOP08100 PRELID3BP1-201ENST00000457142 540 ntBASIC2.53□□□□□ -2
RHOP08100 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
RHOP08100 RNU7-14P-201ENST00000459331 62 ntBASIC2.53□□□□□ -2
RHOP08100 RNU7-120P-201ENST00000459334 63 ntBASIC2.53□□□□□ -2
RHOP08100 AC114982.1-201ENST00000469402 321 ntBASIC2.53□□□□□ -2
RHOP08100 MIR449C-201ENST00000516047 92 ntBASIC2.53□□□□□ -2
RHOP08100 RNA5SP281-201ENST00000516504 135 ntBASIC2.53□□□□□ -2
RHOP08100 MIR4648-201ENST00000580107 72 ntBASIC2.53□□□□□ -2
RHOP08100 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
RHOP08100 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.53□□□□□ -2
RHOP08100 AL078604.3-201ENST00000615580 211 ntBASIC2.53□□□□□ -2
RHOP08100 U6.115-201ENST00000636045 103 ntBASIC2.53□□□□□ -2
RHOP08100 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RHOP08100 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
RHOP08100 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RHOP08100 RNU6-545P-201ENST00000362681 104 ntBASIC2.52□□□□□ -2.01
RHOP08100 Y_RNA.180-201ENST00000363867 113 ntBASIC2.52□□□□□ -2.01
RHOP08100 MIR504-201ENST00000385065 83 ntBASIC2.52□□□□□ -2.01
RHOP08100 CYP2C59P-201ENST00000457790 269 ntBASIC2.52□□□□□ -2.01
RHOP08100 AC090515.1-201ENST00000465295 476 ntBASIC2.52□□□□□ -2.01
RHOP08100 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
RHOP08100 AC022616.8-201ENST00000533569 253 ntBASIC2.52□□□□□ -2.01
RHOP08100 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
RHOP08100 AC009127.3-201ENST00000570531 403 ntBASIC2.52□□□□□ -2.01
RHOP08100 MIR4753-201ENST00000585119 83 ntBASIC2.52□□□□□ -2.01
RHOP08100 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
RHOP08100 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.52□□□□□ -2.01
RHOP08100 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.52□□□□□ -2.01
RHOP08100 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RHOP08100 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RHOP08100 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RHOP08100 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RHOP08100 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RHOP08100 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms