Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RNU6-864P-201ENST00000516256 108 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 RNU6-1088P-201ENST00000516850 104 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 CYCSP23-201ENST00000519781 313 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.04□□□□□ -2.24
CAPN1P07384 AC004584.2-201ENST00000570407 410 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CAPN1P07384 AL021879.1-201ENST00000611756 288 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 SNORD3E-202ENST00000627253 216 ntBASIC1.04□□□□□ -2.24
CAPN1P07384 MIR10B-201ENST00000385011 110 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 RNU7-99P-201ENST00000516271 62 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.03□□□□□ -2.24
CAPN1P07384 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.03□□□□□ -2.24
CAPN1P07384 AL022345.2-201ENST00000606307 135 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 SNORA28-201ENST00000606769 126 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 U6.73-201ENST00000619194 103 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 AC100810.6-201ENST00000638068 285 ntBASIC1.03□□□□□ -2.24
CAPN1P07384 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CAPN1P07384 Y_RNA.89-201ENST00000363031 102 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 Y_RNA.405-201ENST00000383979 100 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 Y_RNA.450-201ENST00000384198 113 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 Y_RNA.451-201ENST00000384200 100 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 RNY1P14-201ENST00000384426 108 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 Y_RNA.524-201ENST00000384564 100 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 Y_RNA.561-201ENST00000384694 100 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CAPN1P07384 AL589823.1-201ENST00000429577 183 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.02□□□□□ -2.25
CAPN1P07384 AC093303.1-201ENST00000514549 295 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 AC091144.1-201ENST00000519573 138 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 AC134698.4-201ENST00000523451 826 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.02□□□□□ -2.25
CAPN1P07384 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CAPN1P07384 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.02□□□□□ -2.25
CAPN1P07384 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.02□□□□□ -2.25
CAPN1P07384 AC136932.1-201ENST00000574771 208 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 AL513534.2-201ENST00000603836 250 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 AC073349.3-201ENST00000617616 186 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 AL513423.1-201ENST00000621695 132 ntBASIC1.02□□□□□ -2.25
CAPN1P07384 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.02□□□□□ -2.25
CAPN1P07384 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.02□□□□□ -2.25
CAPN1P07384 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.01□□□□□ -2.25
CAPN1P07384 Y_RNA.9-201ENST00000362354 101 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 Y_RNA.179-201ENST00000363844 90 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 USP9YP30-201ENST00000430729 455 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 MTND4P18-201ENST00000447010 465 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
CAPN1P07384 SNORA31.4-201ENST00000516049 129 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 MIR5695-201ENST00000579717 85 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 AC012557.2-201ENST00000605919 418 ntBASIC1.01□□□□□ -2.25
CAPN1P07384 RNU6-222P-201ENST00000362438 107 ntBASIC1□□□□□ -2.25
CAPN1P07384 Y_RNA.48-201ENST00000362710 103 ntBASIC1□□□□□ -2.25
CAPN1P07384 Y_RNA.122-201ENST00000363331 96 ntBASIC1□□□□□ -2.25
CAPN1P07384 RNU6-595P-201ENST00000363944 107 ntBASIC1□□□□□ -2.25
CAPN1P07384 RNU4-76P-201ENST00000364509 141 ntBASIC1□□□□□ -2.25
CAPN1P07384 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
CAPN1P07384 RNU6-596P-201ENST00000365395 98 ntBASIC1□□□□□ -2.25
CAPN1P07384 RNU6-842P-201ENST00000384269 107 ntBASIC1□□□□□ -2.25
CAPN1P07384 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1□□□□□ -2.25
CAPN1P07384 MTND3P23-201ENST00000431980 347 ntBASIC1□□□□□ -2.25
CAPN1P07384 MTND1P17-201ENST00000448961 204 ntBASIC1□□□□□ -2.25
CAPN1P07384 RNU7-175P-201ENST00000515915 61 ntBASIC1□□□□□ -2.25
CAPN1P07384 AC027419.1-201ENST00000522976 328 ntBASIC1□□□□□ -2.25
CAPN1P07384 AL590705.4-201ENST00000532209 134 ntBASIC1□□□□□ -2.25
CAPN1P07384 EIF1P4-201ENST00000572664 335 ntBASIC1□□□□□ -2.25
CAPN1P07384 MIR4273-201ENST00000582824 84 ntBASIC1□□□□□ -2.25
CAPN1P07384 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1□□□□□ -2.25
CAPN1P07384 AC068137.4-201ENST00000638485 296 ntBASIC1□□□□□ -2.25
CAPN1P07384 ZNF299P-201ENST00000406845 1804 ntBASIC1□□□□□ -2.25
CAPN1P07384 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CAPN1P07384 Y_RNA.3-201ENST00000362331 103 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 RNU4-12P-201ENST00000365233 139 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 MIR489-201ENST00000384923 84 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 SNORD65B-201ENST00000459126 73 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 AC092991.1-201ENST00000477176 376 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 RPS29P25-201ENST00000481709 171 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 RNU6-322P-201ENST00000516010 103 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 RNU6-720P-201ENST00000516363 108 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 AC023157.2-201ENST00000540596 141 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 RPL21P9-201ENST00000556149 474 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 AC010999.1-201ENST00000611856 324 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 AC106754.2-201ENST00000623006 233 ntBASIC0.99□□□□□ -2.25
CAPN1P07384 Y_RNA.118-201ENST00000363300 101 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 Y_RNA.184-201ENST00000363884 108 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 Y_RNA.295-201ENST00000364918 102 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 RPS27P22-201ENST00000478056 241 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.98□□□□□ -2.25
CAPN1P07384 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
CAPN1P07384 RNU6-107P-201ENST00000516643 102 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 RNU6-566P-201ENST00000516790 107 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms