Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NEFMP07197 AC010332.2-201ENST00000613083 1904 ntBASIC3.64□□□□□ -1.83
NEFMP07197 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
NEFMP07197 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NEFMP07197 RNU4-15P-201ENST00000362613 141 ntBASIC3.63□□□□□ -1.83
NEFMP07197 SNORD87-201ENST00000364849 89 ntBASIC3.63□□□□□ -1.83
NEFMP07197 Y_RNA.293-201ENST00000364908 93 ntBASIC3.63□□□□□ -1.83
NEFMP07197 MIR181A2-201ENST00000384863 110 ntBASIC3.63□□□□□ -1.83
NEFMP07197 MIR627-201ENST00000384979 97 ntBASIC3.63□□□□□ -1.83
NEFMP07197 MIR626-201ENST00000385032 94 ntBASIC3.63□□□□□ -1.83
NEFMP07197 AC004866.1-201ENST00000411748 78 ntBASIC3.63□□□□□ -1.83
NEFMP07197 HMGN2P35-201ENST00000412164 270 ntBASIC3.63□□□□□ -1.83
NEFMP07197 RPL30P13-201ENST00000418873 348 ntBASIC3.63□□□□□ -1.83
NEFMP07197 AC074290.1-201ENST00000448883 135 ntBASIC3.63□□□□□ -1.83
NEFMP07197 RPS3P1-201ENST00000456781 192 ntBASIC3.63□□□□□ -1.83
NEFMP07197 RN7SL297P-201ENST00000483161 293 ntBASIC3.63□□□□□ -1.83
NEFMP07197 RPL23AP70-201ENST00000483361 460 ntBASIC3.63□□□□□ -1.83
NEFMP07197 AC090616.3-201ENST00000582184 217 ntBASIC3.63□□□□□ -1.83
NEFMP07197 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.63□□□□□ -1.83
NEFMP07197 DNAJC19P2-201ENST00000593340 302 ntBASIC3.63□□□□□ -1.83
NEFMP07197 Y_RNA.802-201ENST00000614892 130 ntBASIC3.63□□□□□ -1.83
NEFMP07197 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEFMP07197 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
NEFMP07197 U3.8-201ENST00000363675 217 ntBASIC3.62□□□□□ -1.83
NEFMP07197 RNU6-1210P-201ENST00000363775 107 ntBASIC3.62□□□□□ -1.83
NEFMP07197 Y_RNA.368-201ENST00000365547 113 ntBASIC3.62□□□□□ -1.83
NEFMP07197 MIR513C-201ENST00000401352 84 ntBASIC3.62□□□□□ -1.83
NEFMP07197 RNA5SP184-201ENST00000411071 108 ntBASIC3.62□□□□□ -1.83
NEFMP07197 AC063976.3-201ENST00000426849 329 ntBASIC3.62□□□□□ -1.83
NEFMP07197 AC003982.1-202ENST00000469928 248 ntBASIC3.62□□□□□ -1.83
NEFMP07197 AC145146.1-201ENST00000496370 254 ntBASIC3.62□□□□□ -1.83
NEFMP07197 RN7SKP132-201ENST00000516001 208 ntBASIC3.62□□□□□ -1.83
NEFMP07197 RNU1-117P-201ENST00000517041 158 ntBASIC3.62□□□□□ -1.83
NEFMP07197 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.62□□□□□ -1.83
NEFMP07197 AC025281.1-201ENST00000567026 265 ntBASIC3.62□□□□□ -1.83
NEFMP07197 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.62□□□□□ -1.83
NEFMP07197 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.62□□□□□ -1.83
NEFMP07197 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.62□□□□□ -1.83
NEFMP07197 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.62□□□□□ -1.83
NEFMP07197 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
NEFMP07197 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEFMP07197 AC100821.1-201ENST00000523153 2479 ntBASIC3.62□□□□□ -1.83
NEFMP07197 AC134026.1-201ENST00000623249 2239 ntBASIC3.62□□□□□ -1.83
NEFMP07197 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEFMP07197 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEFMP07197 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NEFMP07197 RNU6-655P-201ENST00000362858 107 ntBASIC3.61□□□□□ -1.83
NEFMP07197 SNORA18.2-201ENST00000383865 132 ntBASIC3.61□□□□□ -1.83
NEFMP07197 Y_RNA.456-201ENST00000384232 111 ntBASIC3.61□□□□□ -1.83
NEFMP07197 RNU2-49P-201ENST00000410666 184 ntBASIC3.61□□□□□ -1.83
NEFMP07197 RNA5SP504-201ENST00000410676 117 ntBASIC3.61□□□□□ -1.83
NEFMP07197 SNORD109B-201ENST00000458961 67 ntBASIC3.61□□□□□ -1.83
NEFMP07197 SNORD109A-201ENST00000459128 67 ntBASIC3.61□□□□□ -1.83
NEFMP07197 MIR5688-201ENST00000580619 83 ntBASIC3.61□□□□□ -1.83
NEFMP07197 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
NEFMP07197 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.6□□□□□ -1.83
NEFMP07197 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEFMP07197 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.6□□□□□ -1.83
NEFMP07197 RNU6-859P-201ENST00000362728 107 ntBASIC3.6□□□□□ -1.83
NEFMP07197 snoU2_19.4-201ENST00000364329 80 ntBASIC3.6□□□□□ -1.83
NEFMP07197 RNU4-11P-201ENST00000365287 132 ntBASIC3.6□□□□□ -1.83
NEFMP07197 MIR616-201ENST00000385293 97 ntBASIC3.6□□□□□ -1.83
NEFMP07197 MIR526A2-201ENST00000390198 65 ntBASIC3.6□□□□□ -1.83
NEFMP07197 RNU6-855P-201ENST00000410395 104 ntBASIC3.6□□□□□ -1.83
NEFMP07197 SRIP1-201ENST00000489235 288 ntBASIC3.6□□□□□ -1.83
NEFMP07197 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.6□□□□□ -1.83
NEFMP07197 RPL23AP94-201ENST00000512518 302 ntBASIC3.6□□□□□ -1.83
NEFMP07197 SNORA70.12-201ENST00000516084 153 ntBASIC3.6□□□□□ -1.83
NEFMP07197 RNU2-44P-201ENST00000516795 194 ntBASIC3.6□□□□□ -1.83
NEFMP07197 DEFB131C-201ENST00000528817 165 ntBASIC3.6□□□□□ -1.83
NEFMP07197 AC022616.8-201ENST00000533569 253 ntBASIC3.6□□□□□ -1.83
NEFMP07197 AC079600.2-201ENST00000550076 130 ntBASIC3.6□□□□□ -1.83
NEFMP07197 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.6□□□□□ -1.83
NEFMP07197 RPL17P51-201ENST00000605218 238 ntBASIC3.6□□□□□ -1.83
NEFMP07197 AL391903.3-201ENST00000612158 163 ntBASIC3.6□□□□□ -1.83
NEFMP07197 AC008873.1-201ENST00000625051 138 ntBASIC3.6□□□□□ -1.83
NEFMP07197 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.59□□□□□ -1.83
NEFMP07197 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NEFMP07197 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NEFMP07197 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.59□□□□□ -1.83
NEFMP07197 RNU1-112P-201ENST00000364401 164 ntBASIC3.59□□□□□ -1.83
NEFMP07197 RNA5SP205-201ENST00000364653 136 ntBASIC3.59□□□□□ -1.83
NEFMP07197 RNU6-818P-201ENST00000364837 108 ntBASIC3.59□□□□□ -1.83
NEFMP07197 Y_RNA.337-201ENST00000365312 102 ntBASIC3.59□□□□□ -1.83
NEFMP07197 Y_RNA.341-201ENST00000365341 102 ntBASIC3.59□□□□□ -1.83
NEFMP07197 Y_RNA.361-201ENST00000365515 120 ntBASIC3.59□□□□□ -1.83
NEFMP07197 Y_RNA.510-201ENST00000384511 114 ntBASIC3.59□□□□□ -1.83
NEFMP07197 MIR196B-201ENST00000384852 84 ntBASIC3.59□□□□□ -1.83
NEFMP07197 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
NEFMP07197 UBE2DNL-203ENST00000474922 222 ntBASIC3.59□□□□□ -1.83
NEFMP07197 AC096725.1-201ENST00000514266 313 ntBASIC3.59□□□□□ -1.83
NEFMP07197 AC109810.1-201ENST00000534066 224 ntBASIC3.59□□□□□ -1.83
NEFMP07197 MIR4319-201ENST00000577285 85 ntBASIC3.59□□□□□ -1.83
NEFMP07197 AL391813.1-201ENST00000603098 260 ntBASIC3.59□□□□□ -1.83
NEFMP07197 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.59□□□□□ -1.83
NEFMP07197 AC069528.2-201ENST00000624849 1991 ntBASIC3.58□□□□□ -1.84
NEFMP07197 Y_RNA.273-201ENST00000364703 102 ntBASIC3.58□□□□□ -1.84
NEFMP07197 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.58□□□□□ -1.84
NEFMP07197 AL137159.1-201ENST00000452808 512 ntBASIC3.58□□□□□ -1.84
NEFMP07197 SNORA25.12-201ENST00000516202 82 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms