Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RNU6-815P-201ENST00000384080 113 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 MIR520G-201ENST00000385064 90 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 MIR520H-201ENST00000385126 88 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 MIR1298-201ENST00000408783 112 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 MIR1302-7-201ENST00000408841 72 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 PIGPP3-201ENST00000425307 415 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.14□□□□□ -2.43
TPM3P06753 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 AC093027.1-201ENST00000546698 429 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.14□□□□□ -2.43
TPM3P06753 AC245014.2-201ENST00000603689 287 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 AC246785.4-201ENST00000605374 287 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 AC087683.2-201ENST00000611384 326 ntBASIC-0.14□□□□□ -2.43
TPM3P06753 RNU4-67P-201ENST00000364569 141 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 RNA5SP517-201ENST00000364724 117 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 RNU6-282P-201ENST00000365357 103 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 RNU6-376P-201ENST00000384731 106 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
TPM3P06753 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.15□□□□□ -2.43
TPM3P06753 AC093534.1-201ENST00000504977 132 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 MTATP6P9-201ENST00000515039 680 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 RNA5SP220-201ENST00000516298 104 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 RNU7-43P-201ENST00000516554 64 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 AP003461.1-201ENST00000528866 78 ntBASIC-0.15□□□□□ -2.43
TPM3P06753 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.15□□□□□ -2.43
TPM3P06753 SNORD114-23-201ENST00000363536 72 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 RNU6-873P-201ENST00000363833 107 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 SNORD114-9-201ENST00000364370 72 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 RNU6-517P-201ENST00000384362 110 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 MIR520F-201ENST00000384824 87 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
TPM3P06753 RNU6-613P-201ENST00000410412 108 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 SNORD83.1-201ENST00000411362 77 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 RNU7-180P-201ENST00000459240 63 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 AC091179.3-201ENST00000474761 144 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 AP003327.1-201ENST00000529684 127 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.16□□□□□ -2.44
TPM3P06753 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.16□□□□□ -2.44
TPM3P06753 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.16□□□□□ -2.44
TPM3P06753 AP001506.1-201ENST00000615444 211 ntBASIC-0.16□□□□□ -2.44
TPM3P06753 MIR32-201ENST00000384965 70 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 RNA5SP95-201ENST00000410319 137 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 AL356010.1-201ENST00000456364 102 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 AC114811.1-201ENST00000507207 168 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 RNU6-863P-201ENST00000515989 104 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 CPDP1-201ENST00000579660 283 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 SNORA4-201ENST00000584302 138 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 AC023932.2-201ENST00000603176 175 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 AL391834.2-201ENST00000609982 546 ntBASIC-0.17□□□□□ -2.44
TPM3P06753 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.18□□□□□ -2.44
TPM3P06753 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 SNORA20B-201ENST00000384220 132 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 MIR521-1-201ENST00000384902 87 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 MIR516B2-201ENST00000385190 85 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 MIR136-201ENST00000385207 82 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 RNU2-9P-201ENST00000410194 145 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 RNU6-325P-201ENST00000411132 105 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 AC243428.1-201ENST00000421099 264 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 AC133104.1-201ENST00000429100 218 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.18□□□□□ -2.44
TPM3P06753 AC005534.2-201ENST00000431047 433 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 MTND1P4-201ENST00000435196 415 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 RPS3AP17-201ENST00000472594 777 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 CCDC34P1-201ENST00000507441 517 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 AC016957.1-201ENST00000534895 309 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 MIR4768-201ENST00000585270 74 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 RBM11P1-201ENST00000604951 799 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 AL355073.2-201ENST00000612106 557 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 HULC.1-201ENST00000612720 240 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 MIR6718-201ENST00000616153 80 ntBASIC-0.18□□□□□ -2.44
TPM3P06753 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
TPM3P06753 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
TPM3P06753 RNA5SP214-201ENST00000363378 118 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 MIR15B-201ENST00000385045 98 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 RNU6-679P-201ENST00000391003 106 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
TPM3P06753 Z99497.1-201ENST00000421282 135 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 AL033528.1-201ENST00000453780 140 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 AC091885.1-201ENST00000506658 268 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 RNA5SP227-201ENST00000516184 113 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 AC091144.1-201ENST00000519573 138 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 MIR4514-201ENST00000581410 57 ntBASIC-0.19□□□□□ -2.44
TPM3P06753 AC027514.1-201ENST00000588561 1603 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 RNU6-181P-201ENST00000363225 107 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 SNORD115-32-201ENST00000364079 82 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.2□□□□□ -2.44
TPM3P06753 AC018865.2-201ENST00000423631 129 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 SNRPGP9-201ENST00000456025 225 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 RNA5SP20-201ENST00000515976 84 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 SNORA18.7-201ENST00000516910 131 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 RNU6-445P-201ENST00000516949 107 ntBASIC-0.2□□□□□ -2.44
TPM3P06753 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.2□□□□□ -2.44
TPM3P06753 MTND4P7-201ENST00000523876 130 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms