Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 Y_RNA.287-201ENST00000364853 94 ntBASIC1.88□□□□□ -2.11
RB1P06400 RNU6-1264P-201ENST00000383891 107 ntBASIC1.88□□□□□ -2.11
RB1P06400 MIR515-2-201ENST00000384883 83 ntBASIC1.88□□□□□ -2.11
RB1P06400 MIR515-1-201ENST00000384884 83 ntBASIC1.88□□□□□ -2.11
RB1P06400 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
RB1P06400 MTND4P28-201ENST00000426217 387 ntBASIC1.88□□□□□ -2.11
RB1P06400 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
RB1P06400 AC074133.1-201ENST00000515696 183 ntBASIC1.88□□□□□ -2.11
RB1P06400 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
RB1P06400 AC144568.1-201ENST00000520139 137 ntBASIC1.88□□□□□ -2.11
RB1P06400 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RB1P06400 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.88□□□□□ -2.11
RB1P06400 RNU6-1266P-201ENST00000362794 105 ntBASIC1.87□□□□□ -2.11
RB1P06400 Y_RNA.58-201ENST00000362807 102 ntBASIC1.87□□□□□ -2.11
RB1P06400 Y_RNA.154-201ENST00000363624 102 ntBASIC1.87□□□□□ -2.11
RB1P06400 Y_RNA.796-201ENST00000364268 102 ntBASIC1.87□□□□□ -2.11
RB1P06400 Y_RNA.799-201ENST00000364992 102 ntBASIC1.87□□□□□ -2.11
RB1P06400 SNORA72.2-201ENST00000365028 127 ntBASIC1.87□□□□□ -2.11
RB1P06400 RNY3P1-201ENST00000365085 102 ntBASIC1.87□□□□□ -2.11
RB1P06400 Y_RNA.355-201ENST00000365462 98 ntBASIC1.87□□□□□ -2.11
RB1P06400 RNY3-201ENST00000365484 102 ntBASIC1.87□□□□□ -2.11
RB1P06400 RNU6-296P-201ENST00000384608 107 ntBASIC1.87□□□□□ -2.11
RB1P06400 RNU6-417P-201ENST00000384712 107 ntBASIC1.87□□□□□ -2.11
RB1P06400 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
RB1P06400 ELOCP21-201ENST00000412558 336 ntBASIC1.87□□□□□ -2.11
RB1P06400 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
RB1P06400 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
RB1P06400 PCNPP5-201ENST00000452246 481 ntBASIC1.87□□□□□ -2.11
RB1P06400 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.87□□□□□ -2.11
RB1P06400 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
RB1P06400 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
RB1P06400 MIR4795-201ENST00000584182 89 ntBASIC1.87□□□□□ -2.11
RB1P06400 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
RB1P06400 AC010615.1-201ENST00000594254 1764 ntBASIC1.87□□□□□ -2.11
RB1P06400 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RB1P06400 Y_RNA.146-201ENST00000363549 102 ntBASIC1.86□□□□□ -2.11
RB1P06400 SNORA33-201ENST00000363664 130 ntBASIC1.86□□□□□ -2.11
RB1P06400 Y_RNA.314-201ENST00000365114 102 ntBASIC1.86□□□□□ -2.11
RB1P06400 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
RB1P06400 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RB1P06400 AF228730.4-201ENST00000421457 183 ntBASIC1.86□□□□□ -2.11
RB1P06400 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
RB1P06400 AC069257.2-201ENST00000441819 155 ntBASIC1.86□□□□□ -2.11
RB1P06400 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.86□□□□□ -2.11
RB1P06400 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
RB1P06400 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RB1P06400 SNORA40.9-201ENST00000515895 93 ntBASIC1.86□□□□□ -2.11
RB1P06400 RNU6-699P-201ENST00000517081 110 ntBASIC1.86□□□□□ -2.11
RB1P06400 RAB11AP2-201ENST00000545905 639 ntBASIC1.86□□□□□ -2.11
RB1P06400 AC084364.2-201ENST00000546924 395 ntBASIC1.86□□□□□ -2.11
RB1P06400 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
RB1P06400 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.86□□□□□ -2.11
RB1P06400 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
RB1P06400 RNY3P11-201ENST00000364153 102 ntBASIC1.85□□□□□ -2.11
RB1P06400 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
RB1P06400 RNU4-42P-201ENST00000364738 142 ntBASIC1.85□□□□□ -2.11
RB1P06400 Y_RNA.463-201ENST00000384271 102 ntBASIC1.85□□□□□ -2.11
RB1P06400 SNORD12B-201ENST00000410433 91 ntBASIC1.85□□□□□ -2.11
RB1P06400 Y_RNA.605-201ENST00000410577 105 ntBASIC1.85□□□□□ -2.11
RB1P06400 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.85□□□□□ -2.11
RB1P06400 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.85□□□□□ -2.11
RB1P06400 Y_RNA.675-201ENST00000516389 149 ntBASIC1.85□□□□□ -2.11
RB1P06400 AC018448.1-201ENST00000552843 316 ntBASIC1.85□□□□□ -2.11
RB1P06400 AC022432.1-201ENST00000595739 310 ntBASIC1.85□□□□□ -2.11
RB1P06400 AL117336.2-201ENST00000602435 335 ntBASIC1.85□□□□□ -2.11
RB1P06400 AC103810.8-201ENST00000607347 118 ntBASIC1.85□□□□□ -2.11
RB1P06400 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.85□□□□□ -2.11
RB1P06400 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RB1P06400 RNU6-1115P-201ENST00000362490 106 ntBASIC1.84□□□□□ -2.11
RB1P06400 RNU4-79P-201ENST00000362764 141 ntBASIC1.84□□□□□ -2.11
RB1P06400 MIR518E-201ENST00000385252 88 ntBASIC1.84□□□□□ -2.11
RB1P06400 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
RB1P06400 RNU6-625P-201ENST00000459412 107 ntBASIC1.84□□□□□ -2.11
RB1P06400 RNU7-169P-201ENST00000459456 61 ntBASIC1.84□□□□□ -2.11
RB1P06400 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.84□□□□□ -2.11
RB1P06400 AL442163.3-201ENST00000554110 156 ntBASIC1.84□□□□□ -2.11
RB1P06400 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.84□□□□□ -2.11
RB1P06400 MIR410-201ENST00000362222 80 ntBASIC1.83□□□□□ -2.12
RB1P06400 SNORA63D-201ENST00000364359 132 ntBASIC1.83□□□□□ -2.12
RB1P06400 Y_RNA.428-201ENST00000384078 102 ntBASIC1.83□□□□□ -2.12
RB1P06400 Y_RNA.498-201ENST00000384460 102 ntBASIC1.83□□□□□ -2.12
RB1P06400 MIR628-201ENST00000385229 95 ntBASIC1.83□□□□□ -2.12
RB1P06400 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
RB1P06400 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.83□□□□□ -2.12
RB1P06400 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
RB1P06400 RNA5SP437-201ENST00000517249 129 ntBASIC1.83□□□□□ -2.12
RB1P06400 AC024995.1-201ENST00000523014 93 ntBASIC1.83□□□□□ -2.12
RB1P06400 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
RB1P06400 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.83□□□□□ -2.12
RB1P06400 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
RB1P06400 U2.1-201ENST00000618978 145 ntBASIC1.83□□□□□ -2.12
RB1P06400 AC138305.3-201ENST00000624988 240 ntBASIC1.83□□□□□ -2.12
RB1P06400 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
RB1P06400 Y_RNA.116-201ENST00000363292 103 ntBASIC1.82□□□□□ -2.12
RB1P06400 Y_RNA.118-201ENST00000363300 101 ntBASIC1.82□□□□□ -2.12
RB1P06400 RNY3P4-201ENST00000384428 101 ntBASIC1.82□□□□□ -2.12
RB1P06400 RNA5SP467-201ENST00000391274 118 ntBASIC1.82□□□□□ -2.12
RB1P06400 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
RB1P06400 AC022028.1-201ENST00000412054 408 ntBASIC1.82□□□□□ -2.12
RB1P06400 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms