Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 MIR4298-201ENST00000584380 73 ntBASIC0.75□□□□□ -2.29
MT-ND4P03905 AC006435.5-201ENST00000624486 112 ntBASIC0.75□□□□□ -2.29
MT-ND4P03905 MIR6079-201ENST00000635807 62 ntBASIC0.75□□□□□ -2.29
MT-ND4P03905 RNU6-222P-201ENST00000362438 107 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU4-79P-201ENST00000362764 141 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU6-199P-201ENST00000362954 107 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU6-1059P-201ENST00000363752 98 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU6-595P-201ENST00000363944 107 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU4-75P-201ENST00000364621 146 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU6-392P-201ENST00000364926 101 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU1-36P-201ENST00000365130 165 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 Y_RNA.517-201ENST00000384551 106 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 MIR19B1-201ENST00000384829 87 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 AL355796.1-201ENST00000406706 323 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 CALM2P4-201ENST00000430810 426 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.74□□□□□ -2.29
MT-ND4P03905 AC097462.1-201ENST00000514125 324 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 AC245505.1-201ENST00000556398 224 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
MT-ND4P03905 AC068137.4-201ENST00000638485 296 ntBASIC0.74□□□□□ -2.29
MT-ND4P03905 ZNF299P-201ENST00000406845 1804 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 Y_RNA.194-201ENST00000363985 102 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-596P-201ENST00000365395 98 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 Y_RNA.363-201ENST00000365529 113 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-281P-201ENST00000384212 103 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-424P-201ENST00000384367 105 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 U8.16-201ENST00000391279 133 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU1-139P-201ENST00000391307 165 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-1148P-201ENST00000410992 104 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 AC245047.7-201ENST00000440265 293 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-1114P-201ENST00000516022 107 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-864P-201ENST00000516256 108 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-947P-201ENST00000516264 106 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-917P-201ENST00000516294 104 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 Y_RNA.683-201ENST00000516508 93 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU6-1088P-201ENST00000516850 104 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 RNU7-172P-201ENST00000517125 64 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 AC109635.3-201ENST00000529536 185 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 AC024909.2-201ENST00000553035 286 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 MIR4769-201ENST00000584126 77 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 SNORA28-201ENST00000606769 126 ntBASIC0.73□□□□□ -2.29
MT-ND4P03905 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
MT-ND4P03905 Y_RNA.48-201ENST00000362710 103 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 Y_RNA.265-201ENST00000364677 108 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 SNORA20B-201ENST00000384220 132 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 MTCO3P19-201ENST00000415864 321 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 USP9YP30-201ENST00000430729 455 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 AC093850.1-201ENST00000454121 251 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 AC091021.1-201ENST00000468051 388 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 OR9P1P-201ENST00000496431 281 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 AC018710.1-201ENST00000506509 158 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 RNU6-1314P-201ENST00000517139 104 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 CBX3P8-201ENST00000532412 525 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.72□□□□□ -2.29
MT-ND4P03905 AC093023.1-201ENST00000547375 507 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 AC090049.2-201ENST00000550377 109 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.72□□□□□ -2.29
MT-ND4P03905 AL359821.1-201ENST00000605519 182 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.72□□□□□ -2.29
MT-ND4P03905 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.72□□□□□ -2.29
MT-ND4P03905 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
MT-ND4P03905 Y_RNA.106-201ENST00000363189 100 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 Y_RNA.402-201ENST00000383972 102 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 RNU6-842P-201ENST00000384269 107 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 RNU6-831P-201ENST00000384548 107 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 Y_RNA.595-201ENST00000410403 105 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 RNU6-1001P-201ENST00000411265 100 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC063976.4-201ENST00000421971 163 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 USMG5P1-201ENST00000425964 177 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 USP9YP16-201ENST00000430287 407 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 DLGAP5P1-201ENST00000430307 464 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 MTND3P21-201ENST00000433774 331 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC002429.1-201ENST00000437672 148 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 RPS4XP11-201ENST00000446897 772 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 USP9YP23-201ENST00000455085 407 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 SNORD124-201ENST00000459577 104 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.71□□□□□ -2.3
MT-ND4P03905 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 SNORD79.1-201ENST00000516069 84 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC091178.2-201ENST00000584401 117 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 MIR6857-201ENST00000613267 93 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 AC005592.1-201ENST00000566527 1640 ntBASIC0.71□□□□□ -2.3
MT-ND4P03905 MTND5P16-201ENST00000460269 1703 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 SNORA1B-201ENST00000362535 133 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 Y_RNA.124-201ENST00000363339 93 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 Y_RNA.267-201ENST00000364679 109 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 Y_RNA.490-201ENST00000384413 102 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 AL451046.2-201ENST00000403074 277 ntBASIC0.7□□□□□ -2.3
MT-ND4P03905 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms