Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.6□□□□□ -2.31
COL4A1P02462 AC009033.1-201ENST00000624279 431 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.6□□□□□ -2.31
COL4A1P02462 SNORD33-201ENST00000362761 85 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 snoU2-30.2-201ENST00000362805 70 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 Y_RNA.372-201ENST00000365599 102 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 RNU6-128P-201ENST00000383976 107 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 MIR487A-201ENST00000385009 80 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 MIR1912-201ENST00000410389 80 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 RNA5SP25-201ENST00000410815 110 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A1P02462 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A1P02462 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A1P02462 Z82188.1-201ENST00000436709 154 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 TPT1P7-201ENST00000458300 517 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 MTCO1P29-201ENST00000496868 288 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A1P02462 RNA5SP437-201ENST00000517249 129 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A1P02462 DEFB131C-201ENST00000528817 165 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.59□□□□□ -2.31
COL4A1P02462 UBL5P4-201ENST00000562584 236 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 MIR4273-201ENST00000582824 84 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 AF250324.2-201ENST00000608299 610 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.59□□□□□ -2.31
COL4A1P02462 AC012676.2-201ENST00000619258 186 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 MIR8063-201ENST00000621930 81 ntBASIC0.59□□□□□ -2.31
COL4A1P02462 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A1P02462 Y_RNA.2-201ENST00000362330 96 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNY3P3-201ENST00000363816 102 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNU6-522P-201ENST00000364497 107 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 Y_RNA.256-201ENST00000364594 104 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNU4-20P-201ENST00000365601 151 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 Y_RNA.436-201ENST00000384097 102 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNU6-281P-201ENST00000384212 103 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 MIR181A1-201ENST00000385026 110 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
COL4A1P02462 RNU6-440P-201ENST00000390882 105 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 MIR1265-201ENST00000408444 86 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNU6-1186P-201ENST00000410429 97 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RPS26P42-201ENST00000413485 326 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.59□□□□□ -2.32
COL4A1P02462 AC069257.2-201ENST00000441819 155 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AL606517.2-201ENST00000442855 241 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 MTCO2P7-201ENST00000446518 666 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 Z83846.1-201ENST00000446798 265 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 NDUFB4P10-201ENST00000452541 359 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC114982.1-201ENST00000469402 321 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 HMGN1P12-201ENST00000499125 195 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.59□□□□□ -2.32
COL4A1P02462 RNU2-34P-201ENST00000516534 121 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNA5SP481-201ENST00000516814 122 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNU6-856P-201ENST00000516959 98 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RNU6-835P-201ENST00000516974 104 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC025647.1-201ENST00000517879 253 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.59□□□□□ -2.32
COL4A1P02462 RAB11AP2-201ENST00000545905 639 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.59□□□□□ -2.32
COL4A1P02462 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 MIR3937-201ENST00000580135 106 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC069114.2-201ENST00000604699 304 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 AC005562.2-201ENST00000618264 111 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.59□□□□□ -2.32
COL4A1P02462 AC099654.12-201ENST00000639868 649 ntBASIC0.59□□□□□ -2.32
COL4A1P02462 Y_RNA.179-201ENST00000363844 90 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 Y_RNA.231-201ENST00000364358 102 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 Y_RNA.301-201ENST00000364990 103 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 SNORA72.2-201ENST00000365028 127 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.58□□□□□ -2.32
COL4A1P02462 MIR548B-201ENST00000385247 97 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
COL4A1P02462 RNU6-780P-201ENST00000391030 104 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 Y_RNA.615-201ENST00000410769 117 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 RNU6-373P-201ENST00000411247 98 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 RNU6-1054P-201ENST00000411293 104 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.58□□□□□ -2.32
COL4A1P02462 MTND3P21-201ENST00000433774 331 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AC027119.1-201ENST00000440877 241 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 PGBD4P5-201ENST00000445958 426 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 RNU7-94P-201ENST00000459576 63 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 RPS26P45-201ENST00000471748 340 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 RNU7-175P-201ENST00000515915 61 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 RNU6-256P-201ENST00000516747 97 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 Y_RNA.704-201ENST00000516851 102 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AC024995.1-201ENST00000523014 93 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AC004584.2-201ENST00000570407 410 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 MIR4742-201ENST00000581069 85 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AC023932.2-201ENST00000603176 175 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 MIR8054-201ENST00000620877 86 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 AL359697.1-201ENST00000624879 587 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 snoZ196.1-201ENST00000625269 89 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 U6.108-201ENST00000637764 58 ntBASIC0.58□□□□□ -2.32
COL4A1P02462 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
COL4A1P02462 RNU6-1252P-201ENST00000363054 104 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 RNA5SP63-201ENST00000391225 112 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 RNU6-908P-201ENST00000410160 94 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 RNU6-57P-201ENST00000411348 103 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 EIF1P1-201ENST00000421436 341 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 MRPS10P2-201ENST00000431226 381 ntBASIC0.57□□□□□ -2.32
COL4A1P02462 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms