Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
CDKL5O76039 OOSP1P1-201ENST00000423265 274 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 AC024067.1-201ENST00000426199 223 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CDKL5O76039 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDKL5O76039 AC121758.2-201ENST00000553271 193 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 MIR4308-201ENST00000580634 81 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 MIR4765-201ENST00000585007 77 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 RPL30P11-203ENST00000598995 310 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 AC006380.1-201ENST00000603598 186 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 AC072026.1-201ENST00000605023 201 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 RNU6-324P-201ENST00000363957 106 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 RNU1-51P-201ENST00000365345 176 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 BTF3P11-201ENST00000426582 477 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.72□□□□□ -1.97
CDKL5O76039 HMGB3P3-201ENST00000510526 400 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.72□□□□□ -1.97
CDKL5O76039 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.72□□□□□ -1.97
CDKL5O76039 MIR5007-201ENST00000583098 95 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 AL365265.1-201ENST00000621045 234 ntBASIC2.72□□□□□ -1.97
CDKL5O76039 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDKL5O76039 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDKL5O76039 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDKL5O76039 SNORD115-30-201ENST00000364117 82 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 Y_RNA.233-201ENST00000364407 101 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 SNORD32B-201ENST00000364460 84 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 Y_RNA.304-201ENST00000365011 112 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 RNU6-746P-201ENST00000384112 109 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 RNU6-187P-201ENST00000384139 106 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL5O76039 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
CDKL5O76039 AL135790.2-201ENST00000437701 267 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 RN7SL636P-201ENST00000497504 294 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.71□□□□□ -1.98
CDKL5O76039 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL5O76039 MIR4513-201ENST00000581077 86 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 MIR3133-201ENST00000583157 78 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 AL670379.2-201ENST00000604983 252 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 UCA1.1-201ENST00000620952 75 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 AC008873.1-201ENST00000625051 138 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 AC090517.3-201ENST00000625170 141 ntBASIC2.71□□□□□ -1.98
CDKL5O76039 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CDKL5O76039 RNU6-653P-201ENST00000363074 106 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 Y_RNA.262-201ENST00000364641 102 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 AL031003.1-201ENST00000404229 172 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.7□□□□□ -1.98
CDKL5O76039 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDKL5O76039 RPL23AP94-201ENST00000512518 302 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.7□□□□□ -1.98
CDKL5O76039 RNU6-406P-201ENST00000516470 107 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 AC109329.2-201ENST00000519658 482 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 MIR5694-201ENST00000581190 76 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.7□□□□□ -1.98
CDKL5O76039 AC046143.2-201ENST00000609789 160 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.7□□□□□ -1.98
CDKL5O76039 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CDKL5O76039 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
CDKL5O76039 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CDKL5O76039 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDKL5O76039 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.69□□□□□ -1.98
CDKL5O76039 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDKL5O76039 RNU1-72P-201ENST00000362976 153 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 MIR548B-201ENST00000385247 97 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 TOMM22P2-201ENST00000430735 237 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 RPS15AP28-201ENST00000435088 386 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 Y_RNA.637-201ENST00000459424 114 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 AC140059.1-201ENST00000489238 361 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 RNA5SP112-201ENST00000515937 99 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 Y_RNA.662-201ENST00000516028 97 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 MIR449C-201ENST00000516047 92 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 RNU6-1219P-201ENST00000516143 112 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 RNU6-1098P-201ENST00000516772 96 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 AP005660.1-201ENST00000522972 293 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 AC021753.1-201ENST00000635724 168 ntBASIC2.69□□□□□ -1.98
CDKL5O76039 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CDKL5O76039 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.69□□□□□ -1.98
CDKL5O76039 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.69□□□□□ -1.98
CDKL5O76039 U3.8-201ENST00000363675 217 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 Y_RNA.240-201ENST00000364469 95 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 RNU6-1083P-201ENST00000384022 107 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 Y_RNA.506-201ENST00000384494 102 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 RNU6-125P-201ENST00000384505 107 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 RNU6-763P-201ENST00000390865 106 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL5O76039 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.68□□□□□ -1.98
CDKL5O76039 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL5O76039 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.68□□□□□ -1.98
CDKL5O76039 PRELID2P1-201ENST00000552837 301 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 AC009127.3-201ENST00000570531 403 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 MIR4672-201ENST00000583126 81 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.68□□□□□ -1.98
CDKL5O76039 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDKL5O76039 MIR203B-201ENST00000636080 86 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 U6.106-201ENST00000636360 105 ntBASIC2.68□□□□□ -1.98
CDKL5O76039 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms