Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK1BO75841 RPL21P9-201ENST00000556149 474 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK1BO75841 AC091178.2-201ENST00000584401 117 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 FAM106DP-201ENST00000586416 501 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AC010620.1-201ENST00000601088 1102 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 PRELID3BP2-201ENST00000605362 201 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AC124303.1-201ENST00000605703 360 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 MIR6857-201ENST00000613267 93 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AL359880.1-201ENST00000621879 266 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AC006435.5-201ENST00000624486 112 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.59□□□□□ -2.31
UPK1BO75841 MIRLET7C-201ENST00000362160 84 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 Y_RNA.405-201ENST00000383979 100 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 Y_RNA.451-201ENST00000384200 100 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 RNU6-1042P-201ENST00000384204 107 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 Y_RNA.524-201ENST00000384564 100 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 Y_RNA.533-201ENST00000384596 114 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 Y_RNA.561-201ENST00000384694 100 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 AC243428.1-201ENST00000421099 264 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 SEPT14P3-201ENST00000439401 183 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 AL732372.2-207ENST00000445840 183 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 SEPT14P2-201ENST00000453405 183 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 LINC01399-202ENST00000458450 244 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 RNU7-66P-201ENST00000459469 62 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.58□□□□□ -2.32
UPK1BO75841 SEPT14P4-201ENST00000513445 186 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 RNU6-1281P-201ENST00000516223 105 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 RNU6-256P-201ENST00000516747 97 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 RNU6-341P-201ENST00000516973 96 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 FO082796.1-201ENST00000523795 183 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.58□□□□□ -2.32
UPK1BO75841 MIR4698-201ENST00000577795 80 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 MIR5696-201ENST00000578474 85 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 MIR3672-201ENST00000584290 82 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 7SK.7-201ENST00000603504 247 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 AP000942.3-201ENST00000603702 160 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 AC091895.1-201ENST00000624494 256 ntBASIC0.58□□□□□ -2.32
UPK1BO75841 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
UPK1BO75841 RNU6-222P-201ENST00000362438 107 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 Y_RNA.140-201ENST00000363474 103 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.57□□□□□ -2.32
UPK1BO75841 RNU6-483P-201ENST00000384088 108 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 RNU6-376P-201ENST00000384731 106 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 MIR526A1-201ENST00000384897 85 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 RNU6-482P-201ENST00000391068 107 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 RNU2-66P-201ENST00000410650 161 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AC018865.2-201ENST00000423631 129 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AL035398.1-201ENST00000430869 322 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AC245047.8-201ENST00000456455 284 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 RNU7-90P-201ENST00000459216 62 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 HMGN2P26-201ENST00000463169 339 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AL049830.1-201ENST00000468034 425 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.57□□□□□ -2.32
UPK1BO75841 RNU7-175P-201ENST00000515915 61 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 SNORD111.1-201ENST00000516421 86 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 Y_RNA.683-201ENST00000516508 93 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 RNU7-28P-201ENST00000516759 62 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AC004832.4-201ENST00000608952 331 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 AC068137.4-201ENST00000638485 296 ntBASIC0.57□□□□□ -2.32
UPK1BO75841 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
UPK1BO75841 RNU5F-3P-201ENST00000363767 117 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 RNA5SP99-201ENST00000364020 114 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 Y_RNA.212-201ENST00000364177 102 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 RNU6-1335P-201ENST00000365426 107 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
UPK1BO75841 MTND3P23-201ENST00000431980 347 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.56□□□□□ -2.32
UPK1BO75841 MTCO2P7-201ENST00000446518 666 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 COX6CP14-201ENST00000469580 174 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.56□□□□□ -2.32
UPK1BO75841 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AC010486.3-201ENST00000511602 785 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 RNA5SP20-201ENST00000515976 84 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 RNU6-405P-201ENST00000516637 110 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.56□□□□□ -2.32
UPK1BO75841 AP002004.2-201ENST00000531656 154 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.56□□□□□ -2.32
UPK1BO75841 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.56□□□□□ -2.32
UPK1BO75841 MIR3192-201ENST00000584920 77 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AC080078.3-201ENST00000605407 463 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AC104465.1-201ENST00000611365 139 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 AL391903.3-201ENST00000612158 163 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 DISC2.1-201ENST00000612827 205 ntBASIC0.56□□□□□ -2.32
UPK1BO75841 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.56□□□□□ -2.32
UPK1BO75841 Y_RNA.327-201ENST00000365201 102 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 RNU6-281P-201ENST00000384212 103 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 RNA5SP482-201ENST00000391269 118 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 Z98949.2-201ENST00000440996 144 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.55□□□□□ -2.32
UPK1BO75841 AC233266.1-201ENST00000454518 96 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 TRBVA-201ENST00000498804 316 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.55□□□□□ -2.32
UPK1BO75841 AC093023.1-201ENST00000547375 507 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 MIR4273-201ENST00000582824 84 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 AL353765.1-201ENST00000605514 183 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 AC092954.2-201ENST00000609103 430 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 AC242852.1-201ENST00000612151 96 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms