Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 AC133104.2-201ENST00000615272 193 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 MIR1302-1-201ENST00000637932 143 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 Y_RNA.259-201ENST00000364619 101 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 RNU6-338P-201ENST00000383888 105 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 Y_RNA.384-201ENST00000383909 102 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 Y_RNA.474-201ENST00000384341 102 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 Y_RNA.557-201ENST00000384680 107 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 SNORA75.6-201ENST00000391318 127 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 MIR1185-2-201ENST00000408687 86 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 MIR1267-201ENST00000408723 78 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 AC016909.1-201ENST00000415916 166 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 EIF1P2-201ENST00000428233 350 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 NDUFB4P10-201ENST00000452541 359 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 MIR2053-201ENST00000459295 91 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
CSDE1O75534 AC022493.2-201ENST00000506122 481 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 RNU6-120P-201ENST00000516077 103 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 AC084364.2-201ENST00000546924 395 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.52□□□□□ -2.17
CSDE1O75534 FRG2DP-202ENST00000566967 323 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 MIR548S-201ENST00000581352 82 ntBASIC1.52□□□□□ -2.17
CSDE1O75534 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.52□□□□□ -2.17
CSDE1O75534 RNA5SP361-201ENST00000362686 118 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 Y_RNA.67-201ENST00000362870 100 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 SNORA72.2-201ENST00000365028 127 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 RNU6-890P-201ENST00000384121 107 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 RNU6-296P-201ENST00000384608 107 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 MIR625-201ENST00000385047 85 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 RNA5SP247-201ENST00000411181 105 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AC114482.1-201ENST00000418010 247 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.51□□□□□ -2.17
CSDE1O75534 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AC245047.4-201ENST00000433189 144 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AC092473.1-201ENST00000441098 221 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AC069257.2-201ENST00000441819 155 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AC093019.1-201ENST00000443135 252 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 U8.22-201ENST00000459141 133 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.51□□□□□ -2.17
CSDE1O75534 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.51□□□□□ -2.17
CSDE1O75534 AC091144.1-201ENST00000519573 138 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AK6P2-201ENST00000549020 471 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 MIR4422-201ENST00000581938 83 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 AL353770.2-201ENST00000620024 78 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 MTND4LP32-201ENST00000636111 270 ntBASIC1.51□□□□□ -2.17
CSDE1O75534 Y_RNA.303-201ENST00000364998 94 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 Y_RNA.387-201ENST00000383918 102 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 MIR515-2-201ENST00000384883 83 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 MIR515-1-201ENST00000384884 83 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.5□□□□□ -2.17
CSDE1O75534 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.5□□□□□ -2.17
CSDE1O75534 HSPE1P9-201ENST00000440046 311 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.5□□□□□ -2.17
CSDE1O75534 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 RNA5SP437-201ENST00000517249 129 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CSDE1O75534 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
CSDE1O75534 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSDE1O75534 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CSDE1O75534 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSDE1O75534 Y_RNA.287-201ENST00000364853 94 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 RNA5SP467-201ENST00000391274 118 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 MTCYBP4-201ENST00000401524 249 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.49□□□□□ -2.17
CSDE1O75534 TOMM22P2-201ENST00000430735 237 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 MTCO3P10-201ENST00000455912 772 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 AC091951.2-201ENST00000500762 203 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 CYCSP23-201ENST00000519781 313 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 AC027419.1-201ENST00000522976 328 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 AC104260.1-201ENST00000616660 539 ntBASIC1.49□□□□□ -2.17
CSDE1O75534 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.49□□□□□ -2.17
CSDE1O75534 RNU6-53P-201ENST00000365367 106 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 Y_RNA.356-201ENST00000365475 113 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 Y_RNA.577-201ENST00000384794 101 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 MIR329-1-201ENST00000385028 80 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 SNORA69.1-201ENST00000390904 137 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 RNU6-360P-201ENST00000390944 104 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 RNU6-1009P-201ENST00000390996 107 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.48□□□□□ -2.17
CSDE1O75534 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 AC105758.1-201ENST00000506038 399 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 RNA5SP481-201ENST00000516814 122 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 AL132765.2-201ENST00000610812 351 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 AC025253.1-201ENST00000613623 543 ntBASIC1.48□□□□□ -2.17
CSDE1O75534 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.48□□□□□ -2.17
CSDE1O75534 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CSDE1O75534 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 RNU6-1156P-201ENST00000410365 100 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 RNU6-1186P-201ENST00000410429 97 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 AC073910.1-201ENST00000445047 438 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 MTND5P20-201ENST00000448677 143 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 AL117351.2-201ENST00000513571 157 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 RNU6-277P-201ENST00000516272 106 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 RNU6-875P-201ENST00000516488 106 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms