Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF40AO75400 AL356292.1-201ENST00000283110 373 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 Y_RNA.172-201ENST00000363765 102 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 SNORA25B-201ENST00000365507 128 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 RNU2-2P-201ENST00000410396 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 AC009238.1-201ENST00000442165 424 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 AC009237.6-201ENST00000446969 424 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.39□□□□□ -1.87
PRPF40AO75400 RNU2-4P-201ENST00000606190 192 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.15-201ENST00000611544 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.16-201ENST00000613119 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.12-201ENST00000613778 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 AL162274.2-201ENST00000614406 332 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.9-201ENST00000615427 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.11-201ENST00000616345 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.2-201ENST00000616535 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.3-201ENST00000617785 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.19-201ENST00000618602 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 RNU2-1-201ENST00000618664 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.6-201ENST00000619225 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.5-201ENST00000619465 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 U2.10-201ENST00000620268 191 ntBASIC3.39□□□□□ -1.87
PRPF40AO75400 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF40AO75400 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF40AO75400 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 Y_RNA.238-201ENST00000364441 102 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 SNORD116-13-201ENST00000384408 92 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 AC117454.1-201ENST00000491120 168 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF40AO75400 RNU6-1278P-201ENST00000516130 107 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 SUMO2P18-201ENST00000518873 252 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF40AO75400 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF40AO75400 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF40AO75400 MIR548AY-201ENST00000617669 107 ntBASIC3.38□□□□□ -1.87
PRPF40AO75400 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
PRPF40AO75400 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF40AO75400 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF40AO75400 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PRPF40AO75400 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 CENPCP1-201ENST00000533085 2578 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PRPF40AO75400 RNU6-1180P-201ENST00000364935 107 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 RNU4-61P-201ENST00000411243 107 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 AC092427.1-202ENST00000430569 476 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 CR769767.1-201ENST00000436337 346 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 AC025750.2-201ENST00000442609 450 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 AC018868.1-201ENST00000491307 315 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 RN7SKP164-201ENST00000516138 266 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 RNA5SP341-201ENST00000516261 117 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 RNU6-856P-201ENST00000516959 98 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 AC021269.2-201ENST00000532318 330 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 MIR4325-201ENST00000583049 90 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 AC004832.4-201ENST00000608952 331 ntBASIC3.37□□□□□ -1.87
PRPF40AO75400 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF40AO75400 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF40AO75400 MIR422A-201ENST00000362286 90 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 MIR367-201ENST00000362299 68 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 Y_RNA.121-201ENST00000363309 113 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 RNU4-13P-201ENST00000364019 141 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 RNU4-10P-201ENST00000364383 140 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 SRIP3-201ENST00000413200 219 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF40AO75400 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF40AO75400 RNU6-56P-201ENST00000516986 93 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 MRPS18CP4-201ENST00000535821 231 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 U4atac.1-201ENST00000618345 95 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.36□□□□□ -1.87
PRPF40AO75400 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF40AO75400 Y_RNA.182-201ENST00000363880 111 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 U8.7-201ENST00000364940 136 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RNU6-144P-201ENST00000383951 107 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RNU6-381P-201ENST00000391259 108 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 AC104389.3-201ENST00000445629 235 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RN7SL499P-201ENST00000481141 276 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RPL36AP21-201ENST00000490372 323 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RNU6-1146P-201ENST00000516282 102 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RNU7-115P-201ENST00000516433 55 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 RNU6-1212P-201ENST00000517023 104 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF40AO75400 MIR4438-201ENST00000585271 93 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 AC005972.2-201ENST00000604690 348 ntBASIC3.35□□□□□ -1.87
PRPF40AO75400 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF40AO75400 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PRPF40AO75400 Y_RNA.24-201ENST00000362508 103 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 U8.9-201ENST00000365667 134 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 MIR512-1-201ENST00000384913 84 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 MIR626-201ENST00000385032 94 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 MIR526A2-201ENST00000390198 65 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 NDUFB4P4-201ENST00000404822 243 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 HMGN2P34-201ENST00000437647 269 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 AP001486.1-201ENST00000463339 476 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 AC091021.1-201ENST00000468051 388 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 RN7SL297P-201ENST00000483161 293 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF40AO75400 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF40AO75400 Y_RNA.797-201ENST00000515977 94 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 RNU6-63P-201ENST00000516690 95 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms