Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU6-1252P-201ENST00000363054 104 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 EIF4E2P1-201ENST00000393781 255 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 TPT1P7-201ENST00000458300 517 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC083798.1-201ENST00000472671 131 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC105758.1-201ENST00000506038 399 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC091133.4-201ENST00000511142 308 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 SNORA62.5-201ENST00000516634 120 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNA5SP168-201ENST00000516642 112 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU6-58P-201ENST00000517143 103 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.72□□□□□ -2.29
NPHP4O75161 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.72□□□□□ -2.29
NPHP4O75161 UBL5P4-201ENST00000562584 236 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.72□□□□□ -2.29
NPHP4O75161 AP001330.5-201ENST00000607176 411 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC017083.3-201ENST00000609955 700 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC006504.8-201ENST00000621046 635 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AP000568.1-201ENST00000282964 442 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU4-79P-201ENST00000362764 141 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 Y_RNA.100-201ENST00000363141 102 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 Y_RNA.124-201ENST00000363339 93 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU6-873P-201ENST00000363833 107 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU4-76P-201ENST00000364509 141 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 Y_RNA.471-201ENST00000384312 102 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AL034345.1-201ENST00000407768 123 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RPL30P16-201ENST00000419341 429 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 MTND1P26-201ENST00000440488 538 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AL353572.1-201ENST00000442490 417 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 STAG3L5P-204ENST00000443759 179 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC093850.1-201ENST00000454121 251 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.72□□□□□ -2.29
NPHP4O75161 RNA5SP285-201ENST00000516619 119 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 RNU6-835P-201ENST00000516974 104 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.72□□□□□ -2.29
NPHP4O75161 AC023157.2-201ENST00000540596 141 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC100830.2-201ENST00000581636 240 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 AC097520.1-201ENST00000624435 385 ntBASIC0.72□□□□□ -2.29
NPHP4O75161 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
NPHP4O75161 RNU6-522P-201ENST00000364497 107 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 MIR660-201ENST00000385235 97 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 SNORD41-201ENST00000386967 70 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 DEFB108C-201ENST00000400154 252 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 RNU6-1068P-201ENST00000410958 103 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AL590632.1-201ENST00000424289 371 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.71□□□□□ -2.3
NPHP4O75161 AC010424.1-201ENST00000506336 297 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.71□□□□□ -2.3
NPHP4O75161 RNU7-99P-201ENST00000516271 62 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 RNA5SP54-201ENST00000516951 92 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AC007834.2-201ENST00000536310 343 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 MTND3P12-201ENST00000559068 328 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AC136932.1-201ENST00000574771 208 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AL513534.2-201ENST00000603836 250 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AC073349.3-201ENST00000617616 186 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 AL158209.2-201ENST00000619266 216 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 MIR6863-201ENST00000636112 90 ntBASIC0.71□□□□□ -2.3
NPHP4O75161 RNU6-1322P-201ENST00000364309 107 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 Y_RNA.373-201ENST00000365600 103 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AC063976.4-201ENST00000421971 163 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AC092447.3-201ENST00000426027 686 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 SNORA31.4-201ENST00000516049 129 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AC027288.2-201ENST00000553028 243 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AC004817.2-201ENST00000561794 651 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.7□□□□□ -2.3
NPHP4O75161 AC004584.2-201ENST00000570407 410 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 MTND1P15-201ENST00000579262 949 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 MIR4661-201ENST00000582720 75 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 RNU6-89P-201ENST00000606519 100 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AC063944.3-201ENST00000609969 533 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 GHRLOS.1-201ENST00000610995 70 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AL513423.1-201ENST00000621695 132 ntBASIC0.7□□□□□ -2.3
NPHP4O75161 AL391516.1-201ENST00000554380 2449 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RNU6-254P-201ENST00000363377 107 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RNU6-137P-201ENST00000363680 108 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 Y_RNA.319-201ENST00000365138 92 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RNU6-245P-201ENST00000384020 107 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 MIR514A2-201ENST00000385131 88 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 MIR514A3-201ENST00000385132 88 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 Y_RNA.582-201ENST00000391023 95 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RNU6-648P-201ENST00000410190 107 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RNU6-1054P-201ENST00000411293 104 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.69□□□□□ -2.3
NPHP4O75161 CALM2P4-201ENST00000430810 426 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 AC245047.7-201ENST00000440265 293 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 AC091179.3-201ENST00000474761 144 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RPL30P10-201ENST00000488148 337 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 MTCO2P30-201ENST00000503662 364 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 AC091885.1-201ENST00000506658 268 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 SNORD79.1-201ENST00000516069 84 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 RNU6-917P-201ENST00000516294 104 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 MIR4438-201ENST00000585271 93 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 AC009248.2-201ENST00000619826 254 ntBASIC0.69□□□□□ -2.3
NPHP4O75161 AC090582.1-201ENST00000636321 199 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms