Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RPL26P26-201ENST00000480251 434 ntBASIC1.6□□□□□ -2.15
SNX3O60493 AC010469.2-201ENST00000496412 480 ntBASIC1.6□□□□□ -2.15
SNX3O60493 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
SNX3O60493 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SNX3O60493 AC010598.1-201ENST00000510378 103 ntBASIC1.6□□□□□ -2.15
SNX3O60493 RNU6-976P-201ENST00000516086 111 ntBASIC1.6□□□□□ -2.15
SNX3O60493 RNU6-911P-201ENST00000516523 104 ntBASIC1.6□□□□□ -2.15
SNX3O60493 RNU1-142P-201ENST00000516682 145 ntBASIC1.6□□□□□ -2.15
SNX3O60493 RNU7-128P-201ENST00000517247 62 ntBASIC1.6□□□□□ -2.15
SNX3O60493 AC024995.1-201ENST00000523014 93 ntBASIC1.6□□□□□ -2.15
SNX3O60493 AC023157.2-201ENST00000540596 141 ntBASIC1.6□□□□□ -2.15
SNX3O60493 MIR4435-1-201ENST00000582552 80 ntBASIC1.6□□□□□ -2.15
SNX3O60493 VN1R91P-201ENST00000594377 169 ntBASIC1.6□□□□□ -2.15
SNX3O60493 AC092447.9-201ENST00000603395 144 ntBASIC1.6□□□□□ -2.15
SNX3O60493 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SNX3O60493 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SNX3O60493 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
SNX3O60493 RNU6-661P-201ENST00000362409 107 ntBASIC1.59□□□□□ -2.15
SNX3O60493 SNORA4.2-201ENST00000365313 147 ntBASIC1.59□□□□□ -2.15
SNX3O60493 RNA5SP109-201ENST00000391010 116 ntBASIC1.59□□□□□ -2.15
SNX3O60493 RN7SKP192-201ENST00000411291 327 ntBASIC1.59□□□□□ -2.15
SNX3O60493 EBAG9P1-201ENST00000418955 543 ntBASIC1.59□□□□□ -2.15
SNX3O60493 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
SNX3O60493 AL606517.2-201ENST00000442855 241 ntBASIC1.59□□□□□ -2.15
SNX3O60493 FCF1P4-201ENST00000448326 183 ntBASIC1.59□□□□□ -2.15
SNX3O60493 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
SNX3O60493 UBE2DNL-203ENST00000474922 222 ntBASIC1.59□□□□□ -2.15
SNX3O60493 RPS27P22-201ENST00000478056 241 ntBASIC1.59□□□□□ -2.15
SNX3O60493 RNU6-1012P-201ENST00000516606 109 ntBASIC1.59□□□□□ -2.15
SNX3O60493 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.59□□□□□ -2.15
SNX3O60493 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.59□□□□□ -2.15
SNX3O60493 AC055872.1-201ENST00000570978 278 ntBASIC1.59□□□□□ -2.15
SNX3O60493 AL080274.1-201ENST00000605565 220 ntBASIC1.59□□□□□ -2.15
SNX3O60493 AL050343.2-201ENST00000607338 280 ntBASIC1.59□□□□□ -2.15
SNX3O60493 AC011476.5-201ENST00000615594 130 ntBASIC1.59□□□□□ -2.15
SNX3O60493 U6.115-201ENST00000636045 103 ntBASIC1.59□□□□□ -2.15
SNX3O60493 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.16
SNX3O60493 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SNX3O60493 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SNX3O60493 SNORD78.2-201ENST00000391076 69 ntBASIC1.58□□□□□ -2.16
SNX3O60493 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
SNX3O60493 AC018865.2-201ENST00000423631 129 ntBASIC1.58□□□□□ -2.16
SNX3O60493 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.58□□□□□ -2.16
SNX3O60493 RPS26P45-201ENST00000471748 340 ntBASIC1.58□□□□□ -2.16
SNX3O60493 HMGN1P13-201ENST00000505795 138 ntBASIC1.58□□□□□ -2.16
SNX3O60493 RNU4-77P-201ENST00000516692 156 ntBASIC1.58□□□□□ -2.16
SNX3O60493 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.58□□□□□ -2.16
SNX3O60493 MIR4438-201ENST00000585271 93 ntBASIC1.58□□□□□ -2.16
SNX3O60493 AC006435.5-201ENST00000624486 112 ntBASIC1.58□□□□□ -2.16
SNX3O60493 U6.92-201ENST00000636464 89 ntBASIC1.58□□□□□ -2.16
SNX3O60493 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SNX3O60493 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
SNX3O60493 Y_RNA.27-201ENST00000362540 103 ntBASIC1.57□□□□□ -2.16
SNX3O60493 Y_RNA.80-201ENST00000362996 102 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RNU6-1310P-201ENST00000384153 107 ntBASIC1.57□□□□□ -2.16
SNX3O60493 Y_RNA.485-201ENST00000384395 102 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RNU6-360P-201ENST00000390944 104 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.57□□□□□ -2.16
SNX3O60493 MRPS10P1-201ENST00000448483 130 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RPL36AP21-201ENST00000490372 323 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RNU6-1170P-201ENST00000515974 106 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RNU7-99P-201ENST00000516271 62 ntBASIC1.57□□□□□ -2.16
SNX3O60493 RNA5SP481-201ENST00000516814 122 ntBASIC1.57□□□□□ -2.16
SNX3O60493 AC023442.1-201ENST00000531247 422 ntBASIC1.57□□□□□ -2.16
SNX3O60493 MIR4659A-201ENST00000580269 81 ntBASIC1.57□□□□□ -2.16
SNX3O60493 MIR5188-201ENST00000583467 113 ntBASIC1.57□□□□□ -2.16
SNX3O60493 SNORD58B-201ENST00000607313 66 ntBASIC1.57□□□□□ -2.16
SNX3O60493 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.57□□□□□ -2.16
SNX3O60493 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
SNX3O60493 AC004467.1-201ENST00000615678 330 ntBASIC1.57□□□□□ -2.16
SNX3O60493 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
SNX3O60493 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNX3O60493 MIR369-201ENST00000362155 70 ntBASIC1.56□□□□□ -2.16
SNX3O60493 Y_RNA.39-201ENST00000362620 98 ntBASIC1.56□□□□□ -2.16
SNX3O60493 RNU1-115P-201ENST00000365329 160 ntBASIC1.56□□□□□ -2.16
SNX3O60493 Y_RNA.431-201ENST00000384086 102 ntBASIC1.56□□□□□ -2.16
SNX3O60493 RNY1P14-201ENST00000384426 108 ntBASIC1.56□□□□□ -2.16
SNX3O60493 Y_RNA.500-201ENST00000384466 111 ntBASIC1.56□□□□□ -2.16
SNX3O60493 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
SNX3O60493 AL121890.1-201ENST00000435457 205 ntBASIC1.56□□□□□ -2.16
SNX3O60493 RPS27P1-201ENST00000450552 247 ntBASIC1.56□□□□□ -2.16
SNX3O60493 AC025465.3-201ENST00000510570 311 ntBASIC1.56□□□□□ -2.16
SNX3O60493 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
SNX3O60493 AC110588.1-201ENST00000559699 137 ntBASIC1.56□□□□□ -2.16
SNX3O60493 MIR3684-201ENST00000579779 74 ntBASIC1.56□□□□□ -2.16
SNX3O60493 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
SNX3O60493 AC006157.1-201ENST00000611750 366 ntBASIC1.56□□□□□ -2.16
SNX3O60493 uc_338.22-201ENST00000622722 187 ntBASIC1.56□□□□□ -2.16
SNX3O60493 AL606534.2-204ENST00000635008 178 ntBASIC1.56□□□□□ -2.16
SNX3O60493 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
SNX3O60493 SNORA27.1-201ENST00000362604 124 ntBASIC1.55□□□□□ -2.16
SNX3O60493 Y_RNA.61-201ENST00000362835 102 ntBASIC1.55□□□□□ -2.16
SNX3O60493 Y_RNA.112-201ENST00000363250 102 ntBASIC1.55□□□□□ -2.16
SNX3O60493 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
SNX3O60493 RNU6-407P-201ENST00000365280 104 ntBASIC1.55□□□□□ -2.16
SNX3O60493 SNORD42.2-201ENST00000365570 69 ntBASIC1.55□□□□□ -2.16
SNX3O60493 RPL21P1-201ENST00000399532 476 ntBASIC1.55□□□□□ -2.16
SNX3O60493 MRPL35P1-201ENST00000404272 572 ntBASIC1.55□□□□□ -2.16
SNX3O60493 MTCO3P19-201ENST00000415864 321 ntBASIC1.55□□□□□ -2.16
SNX3O60493 AL137792.2-201ENST00000443484 235 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms