Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
SGCEO43556 MRPS10P2-201ENST00000431226 381 ntBASIC0.28□□□□□ -2.36
SGCEO43556 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.28□□□□□ -2.36
SGCEO43556 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.28□□□□□ -2.36
SGCEO43556 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.28□□□□□ -2.36
SGCEO43556 AP003716.2-201ENST00000528260 108 ntBASIC0.28□□□□□ -2.36
SGCEO43556 AC027288.2-201ENST00000553028 243 ntBASIC0.28□□□□□ -2.36
SGCEO43556 MIR3915-201ENST00000578518 97 ntBASIC0.28□□□□□ -2.36
SGCEO43556 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.28□□□□□ -2.36
SGCEO43556 AC006504.8-201ENST00000621046 635 ntBASIC0.28□□□□□ -2.36
SGCEO43556 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.28□□□□□ -2.36
SGCEO43556 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
SGCEO43556 SNORA1B-201ENST00000362535 133 ntBASIC0.27□□□□□ -2.37
SGCEO43556 RNU6-727P-201ENST00000363592 107 ntBASIC0.27□□□□□ -2.37
SGCEO43556 RNU6-873P-201ENST00000363833 107 ntBASIC0.27□□□□□ -2.37
SGCEO43556 Y_RNA.336-201ENST00000365307 109 ntBASIC0.27□□□□□ -2.37
SGCEO43556 RNU6-541P-201ENST00000384709 110 ntBASIC0.27□□□□□ -2.37
SGCEO43556 MIR526A1-201ENST00000384897 85 ntBASIC0.27□□□□□ -2.37
SGCEO43556 MT-TH-201ENST00000387441 69 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AL590002.1-201ENST00000406554 418 ntBASIC0.27□□□□□ -2.37
SGCEO43556 RNA5SP222-201ENST00000411039 105 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.27□□□□□ -2.37
SGCEO43556 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.27□□□□□ -2.37
SGCEO43556 AL358934.1-201ENST00000432346 324 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AL353572.1-201ENST00000442490 417 ntBASIC0.27□□□□□ -2.37
SGCEO43556 MTND1P27-201ENST00000451117 902 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AC091021.1-201ENST00000468051 388 ntBASIC0.27□□□□□ -2.37
SGCEO43556 SNORA19.2-201ENST00000516013 114 ntBASIC0.27□□□□□ -2.37
SGCEO43556 MTCO2P4-201ENST00000517968 247 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
SGCEO43556 SNORA4-201ENST00000584302 138 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AC091178.2-201ENST00000584401 117 ntBASIC0.27□□□□□ -2.37
SGCEO43556 RMST_2.1-201ENST00000617263 136 ntBASIC0.27□□□□□ -2.37
SGCEO43556 AC007494.3-201ENST00000624660 743 ntBASIC0.27□□□□□ -2.37
SGCEO43556 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SGCEO43556 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
SGCEO43556 SNORA36.2-201ENST00000384004 127 ntBASIC0.26□□□□□ -2.37
SGCEO43556 SNORD111-201ENST00000408139 94 ntBASIC0.26□□□□□ -2.37
SGCEO43556 MTCO2P16-201ENST00000436962 677 ntBASIC0.26□□□□□ -2.37
SGCEO43556 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.26□□□□□ -2.37
SGCEO43556 AC091179.3-201ENST00000474761 144 ntBASIC0.26□□□□□ -2.37
SGCEO43556 AC104383.1-201ENST00000530297 370 ntBASIC0.26□□□□□ -2.37
SGCEO43556 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
SGCEO43556 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
SGCEO43556 AC022709.1-201ENST00000615967 87 ntBASIC0.26□□□□□ -2.37
SGCEO43556 Y_RNA.354-201ENST00000365448 111 ntBASIC0.25□□□□□ -2.37
SGCEO43556 RNU1-139P-201ENST00000391307 165 ntBASIC0.25□□□□□ -2.37
SGCEO43556 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.25□□□□□ -2.37
SGCEO43556 AL358944.1-201ENST00000528537 144 ntBASIC0.25□□□□□ -2.37
SGCEO43556 MIR3684-201ENST00000579779 74 ntBASIC0.25□□□□□ -2.37
SGCEO43556 AL133215.3-201ENST00000609801 448 ntBASIC0.25□□□□□ -2.37
SGCEO43556 AL121757.2-201ENST00000611223 313 ntBASIC0.25□□□□□ -2.37
SGCEO43556 AL158063.1-201ENST00000615349 536 ntBASIC0.25□□□□□ -2.37
SGCEO43556 AC027279.3-201ENST00000625055 122 ntBASIC0.25□□□□□ -2.37
SGCEO43556 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
SGCEO43556 Y_RNA.179-201ENST00000363844 90 ntBASIC0.24□□□□□ -2.37
SGCEO43556 MIR518E-201ENST00000385252 88 ntBASIC0.24□□□□□ -2.37
SGCEO43556 SNORD37.1-201ENST00000390968 65 ntBASIC0.24□□□□□ -2.37
SGCEO43556 RNA5SP193-201ENST00000410353 107 ntBASIC0.24□□□□□ -2.37
SGCEO43556 RNU6-994P-201ENST00000410507 111 ntBASIC0.24□□□□□ -2.37
SGCEO43556 AL365203.2-201ENST00000423444 196 ntBASIC0.24□□□□□ -2.37
SGCEO43556 DAP3P1-201ENST00000441522 278 ntBASIC0.24□□□□□ -2.37
SGCEO43556 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.24□□□□□ -2.37
SGCEO43556 MTND5P16-201ENST00000460269 1703 ntBASIC0.24□□□□□ -2.37
SGCEO43556 SNORD50.1-201ENST00000362987 71 ntBASIC0.23□□□□□ -2.37
SGCEO43556 RNU6-376P-201ENST00000384731 106 ntBASIC0.23□□□□□ -2.37
SGCEO43556 MIR452-201ENST00000385020 85 ntBASIC0.23□□□□□ -2.37
SGCEO43556 SNORD105-201ENST00000386910 85 ntBASIC0.23□□□□□ -2.37
SGCEO43556 RNU6-1158P-201ENST00000391167 107 ntBASIC0.23□□□□□ -2.37
SGCEO43556 MIR1185-1-201ENST00000408598 86 ntBASIC0.23□□□□□ -2.37
SGCEO43556 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.23□□□□□ -2.37
SGCEO43556 ZNF885P-201ENST00000420174 1098 ntBASIC0.23□□□□□ -2.37
SGCEO43556 Y_RNA.654-201ENST00000497848 106 ntBASIC0.23□□□□□ -2.37
SGCEO43556 AC107401.1-201ENST00000503426 685 ntBASIC0.23□□□□□ -2.37
SGCEO43556 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.23□□□□□ -2.37
SGCEO43556 CYCTP-201ENST00000504253 315 ntBASIC0.23□□□□□ -2.37
SGCEO43556 AC093303.1-201ENST00000514549 295 ntBASIC0.23□□□□□ -2.37
SGCEO43556 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
SGCEO43556 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.23□□□□□ -2.37
SGCEO43556 PIGPP4-201ENST00000584447 307 ntBASIC0.23□□□□□ -2.37
SGCEO43556 AL158209.2-201ENST00000619266 216 ntBASIC0.23□□□□□ -2.37
SGCEO43556 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.23□□□□□ -2.37
SGCEO43556 AC073544.1-201ENST00000600110 1595 ntBASIC0.23□□□□□ -2.37
SGCEO43556 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
SGCEO43556 RNU6-159P-201ENST00000391080 106 ntBASIC0.22□□□□□ -2.37
SGCEO43556 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.22□□□□□ -2.37
SGCEO43556 AC079354.2-201ENST00000453523 154 ntBASIC0.22□□□□□ -2.37
SGCEO43556 HMGN2P26-201ENST00000463169 339 ntBASIC0.22□□□□□ -2.37
SGCEO43556 AC091885.1-201ENST00000506658 268 ntBASIC0.22□□□□□ -2.37
SGCEO43556 RNA5SP436-201ENST00000516020 115 ntBASIC0.22□□□□□ -2.37
SGCEO43556 RNU6-1038P-201ENST00000516516 104 ntBASIC0.22□□□□□ -2.37
SGCEO43556 RNU11-2P-201ENST00000516898 142 ntBASIC0.22□□□□□ -2.37
SGCEO43556 AC060788.1-201ENST00000521318 469 ntBASIC0.22□□□□□ -2.37
SGCEO43556 AC026371.1-201ENST00000551867 419 ntBASIC0.22□□□□□ -2.37
SGCEO43556 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SGCEO43556 AL136370.1-201ENST00000608166 691 ntBASIC0.22□□□□□ -2.37
SGCEO43556 AC073534.2-201ENST00000620377 381 ntBASIC0.22□□□□□ -2.37
SGCEO43556 AL589743.1-201ENST00000551932 2712 ntBASIC0.22□□□□□ -2.37
SGCEO43556 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
SGCEO43556 Y_RNA.378-201ENST00000365652 113 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms