Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 AL137100.2-201ENST00000555786 315 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 MIR4659A-201ENST00000580269 81 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 U6.73-201ENST00000619194 103 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 U6.92-201ENST00000636464 89 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 U6.108-201ENST00000637764 58 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
XRCC3O43542 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
XRCC3O43542 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
XRCC3O43542 Y_RNA.445-201ENST00000384168 102 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 AL355796.1-201ENST00000406706 323 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 RN7SKP192-201ENST00000411291 327 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.72□□□□□ -2.13
XRCC3O43542 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.72□□□□□ -2.13
XRCC3O43542 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.72□□□□□ -2.13
XRCC3O43542 snoU13.15-201ENST00000459407 104 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
XRCC3O43542 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
XRCC3O43542 AC005828.6-201ENST00000606610 232 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 AL359075.3-201ENST00000613288 217 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 AC240442.1-201ENST00000616055 283 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 AC010205.1-201ENST00000616668 449 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 AC007485.1-201ENST00000616755 206 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
XRCC3O43542 U6.115-201ENST00000636045 103 ntBASIC1.72□□□□□ -2.13
XRCC3O43542 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
XRCC3O43542 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
XRCC3O43542 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
XRCC3O43542 Y_RNA.80-201ENST00000362996 102 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 Y_RNA.128-201ENST00000363391 112 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 Y_RNA.243-201ENST00000364481 109 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 Y_RNA.394-201ENST00000383942 103 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 SNORA20B-201ENST00000384220 132 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 RNU6-474P-201ENST00000384243 107 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 Y_RNA.485-201ENST00000384395 102 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
XRCC3O43542 MCFD2P1-201ENST00000417812 300 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.71□□□□□ -2.14
XRCC3O43542 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 DPH3P2-201ENST00000422618 250 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 PMCHL1-202ENST00000423102 261 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.71□□□□□ -2.14
XRCC3O43542 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
XRCC3O43542 MTND4P19-201ENST00000446659 478 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 AC093852.1-201ENST00000503587 266 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 RNU1-142P-201ENST00000516682 145 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 MIR4648-201ENST00000580107 72 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.71□□□□□ -2.14
XRCC3O43542 AC103810.8-201ENST00000607347 118 ntBASIC1.71□□□□□ -2.14
XRCC3O43542 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
XRCC3O43542 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
XRCC3O43542 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
XRCC3O43542 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
XRCC3O43542 Y_RNA.31-201ENST00000362574 102 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 Y_RNA.526-201ENST00000384572 110 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
XRCC3O43542 MIR1302-11-201ENST00000408051 138 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 MIR1302-9-201ENST00000408365 138 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 MIR1302-10-201ENST00000408734 138 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 EBAG9P1-201ENST00000418955 543 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 SUMO1P2-201ENST00000452524 304 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 AC112492.4-201ENST00000456549 352 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 Y_RNA.631-201ENST00000459607 101 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
XRCC3O43542 AC108210.2-201ENST00000503681 201 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
XRCC3O43542 RNU7-99P-201ENST00000516271 62 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 RNA5SP437-201ENST00000517249 129 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 RN7SKP295-201ENST00000517264 153 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 IGKV3-31-201ENST00000523109 329 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 GNAI2P1-201ENST00000541815 315 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 HSBP1P1-201ENST00000555205 166 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 AC055872.1-201ENST00000570978 278 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 MIR1302-2-201ENST00000607096 138 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 AC011476.5-201ENST00000615594 130 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 AC004467.1-201ENST00000615678 330 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 AC134503.1-201ENST00000633048 54 ntBASIC1.7□□□□□ -2.14
XRCC3O43542 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
XRCC3O43542 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
XRCC3O43542 RNU6-626P-201ENST00000363354 107 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RNU6-20P-201ENST00000384106 107 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 MIR676-201ENST00000390702 67 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RNU6-308P-201ENST00000390957 107 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RNA5SP323-201ENST00000391094 133 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 HMGN2P19-201ENST00000425149 265 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.69□□□□□ -2.14
XRCC3O43542 MRPS10P1-201ENST00000448483 130 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RPS26P45-201ENST00000471748 340 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.69□□□□□ -2.14
XRCC3O43542 AL163195.1-201ENST00000496941 348 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.69□□□□□ -2.14
XRCC3O43542 SNORA25.10-201ENST00000515926 124 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RNU2-12P-201ENST00000517216 168 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RNU7-128P-201ENST00000517247 62 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.69□□□□□ -2.14
XRCC3O43542 MIR4438-201ENST00000585271 93 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms