Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC090971.5-201ENST00000621102 293 ntBASIC1.74□□□□□ -2.13
O00370 RNU6-797P-201ENST00000363101 109 ntBASIC1.73□□□□□ -2.13
O00370 RNU6-708P-201ENST00000384217 107 ntBASIC1.73□□□□□ -2.13
O00370 Y_RNA.498-201ENST00000384460 102 ntBASIC1.73□□□□□ -2.13
O00370 RNU6-417P-201ENST00000384712 107 ntBASIC1.73□□□□□ -2.13
O00370 SNORA48.1-201ENST00000390879 135 ntBASIC1.73□□□□□ -2.13
O00370 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
O00370 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.73□□□□□ -2.13
O00370 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.73□□□□□ -2.13
O00370 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
O00370 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
O00370 Y_RNA.39-201ENST00000362620 98 ntBASIC1.72□□□□□ -2.13
O00370 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
O00370 Y_RNA.431-201ENST00000384086 102 ntBASIC1.72□□□□□ -2.13
O00370 Y_RNA.445-201ENST00000384168 102 ntBASIC1.72□□□□□ -2.13
O00370 Y_RNA.496-201ENST00000384444 101 ntBASIC1.72□□□□□ -2.13
O00370 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
O00370 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.72□□□□□ -2.13
O00370 CHEK2P4-201ENST00000450340 246 ntBASIC1.72□□□□□ -2.13
O00370 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.72□□□□□ -2.13
O00370 RNU6-408P-201ENST00000515910 100 ntBASIC1.72□□□□□ -2.13
O00370 RNU6-976P-201ENST00000516086 111 ntBASIC1.72□□□□□ -2.13
O00370 RN7SKP49-201ENST00000516675 260 ntBASIC1.72□□□□□ -2.13
O00370 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.72□□□□□ -2.13
O00370 AC018448.1-201ENST00000552843 316 ntBASIC1.72□□□□□ -2.13
O00370 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.72□□□□□ -2.13
O00370 AP000942.3-201ENST00000603702 160 ntBASIC1.72□□□□□ -2.13
O00370 AL080274.1-201ENST00000605565 220 ntBASIC1.72□□□□□ -2.13
O00370 AC022513.1-201ENST00000624512 117 ntBASIC1.72□□□□□ -2.13
O00370 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
O00370 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
O00370 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
O00370 SNORA33-201ENST00000363664 130 ntBASIC1.71□□□□□ -2.14
O00370 RNU6-1145P-201ENST00000384246 107 ntBASIC1.71□□□□□ -2.14
O00370 Y_RNA.460-201ENST00000384255 102 ntBASIC1.71□□□□□ -2.14
O00370 RNA5SP323-201ENST00000391094 133 ntBASIC1.71□□□□□ -2.14
O00370 SNORA17.3-201ENST00000391159 129 ntBASIC1.71□□□□□ -2.14
O00370 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
O00370 AC016909.1-201ENST00000415916 166 ntBASIC1.71□□□□□ -2.14
O00370 AC008134.1-201ENST00000420943 193 ntBASIC1.71□□□□□ -2.14
O00370 PCNPP5-201ENST00000452246 481 ntBASIC1.71□□□□□ -2.14
O00370 RNU6-221P-201ENST00000459541 99 ntBASIC1.71□□□□□ -2.14
O00370 HMGN1P13-201ENST00000505795 138 ntBASIC1.71□□□□□ -2.14
O00370 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.71□□□□□ -2.14
O00370 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
O00370 AC069114.2-201ENST00000604699 304 ntBASIC1.71□□□□□ -2.14
O00370 AC016925.2-201ENST00000605108 242 ntBASIC1.71□□□□□ -2.14
O00370 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.71□□□□□ -2.14
O00370 AL160413.1-201ENST00000622780 310 ntBASIC1.71□□□□□ -2.14
O00370 Y_RNA.5-201ENST00000362334 102 ntBASIC1.7□□□□□ -2.14
O00370 snoU2-30.2-201ENST00000362805 70 ntBASIC1.7□□□□□ -2.14
O00370 Y_RNA.80-201ENST00000362996 102 ntBASIC1.7□□□□□ -2.14
O00370 Y_RNA.197-201ENST00000364004 102 ntBASIC1.7□□□□□ -2.14
O00370 Y_RNA.394-201ENST00000383942 103 ntBASIC1.7□□□□□ -2.14
O00370 Y_RNA.485-201ENST00000384395 102 ntBASIC1.7□□□□□ -2.14
O00370 Y_RNA.535-201ENST00000384612 99 ntBASIC1.7□□□□□ -2.14
O00370 SNORD78.2-201ENST00000391076 69 ntBASIC1.7□□□□□ -2.14
O00370 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
O00370 MIR1185-2-201ENST00000408687 86 ntBASIC1.7□□□□□ -2.14
O00370 RNU2-7P-201ENST00000410794 178 ntBASIC1.7□□□□□ -2.14
O00370 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.7□□□□□ -2.14
O00370 MTND1P14-201ENST00000427400 950 ntBASIC1.7□□□□□ -2.14
O00370 TOMM22P2-201ENST00000430735 237 ntBASIC1.7□□□□□ -2.14
O00370 AC099677.2-201ENST00000436385 175 ntBASIC1.7□□□□□ -2.14
O00370 SNORD13-201ENST00000459299 104 ntBASIC1.7□□□□□ -2.14
O00370 MIR2355-201ENST00000517199 87 ntBASIC1.7□□□□□ -2.14
O00370 AC025647.1-201ENST00000517879 253 ntBASIC1.7□□□□□ -2.14
O00370 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.7□□□□□ -2.14
O00370 AL442163.3-201ENST00000554110 156 ntBASIC1.7□□□□□ -2.14
O00370 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.7□□□□□ -2.14
O00370 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.7□□□□□ -2.14
O00370 AC007485.1-201ENST00000616755 206 ntBASIC1.7□□□□□ -2.14
O00370 MIR4272-201ENST00000635924 64 ntBASIC1.7□□□□□ -2.14
O00370 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
O00370 SNORA72.2-201ENST00000365028 127 ntBASIC1.69□□□□□ -2.14
O00370 RNU6-1240P-201ENST00000365155 104 ntBASIC1.69□□□□□ -2.14
O00370 Y_RNA.338-201ENST00000365320 114 ntBASIC1.69□□□□□ -2.14
O00370 RNU6-1264P-201ENST00000383891 107 ntBASIC1.69□□□□□ -2.14
O00370 RNU6-1186P-201ENST00000410429 97 ntBASIC1.69□□□□□ -2.14
O00370 RNA5SP100-201ENST00000410903 110 ntBASIC1.69□□□□□ -2.14
O00370 RNA5SP59-201ENST00000410922 110 ntBASIC1.69□□□□□ -2.14
O00370 ELOCP21-201ENST00000412558 336 ntBASIC1.69□□□□□ -2.14
O00370 RAB28P5-201ENST00000427490 651 ntBASIC1.69□□□□□ -2.14
O00370 AC108667.1-201ENST00000428618 249 ntBASIC1.69□□□□□ -2.14
O00370 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.69□□□□□ -2.14
O00370 RNU6-1146P-201ENST00000516282 102 ntBASIC1.69□□□□□ -2.14
O00370 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.69□□□□□ -2.14
O00370 AC023442.1-201ENST00000531247 422 ntBASIC1.69□□□□□ -2.14
O00370 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.69□□□□□ -2.14
O00370 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
O00370 VN1R91P-201ENST00000594377 169 ntBASIC1.69□□□□□ -2.14
O00370 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.69□□□□□ -2.14
O00370 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.69□□□□□ -2.14
O00370 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.69□□□□□ -2.14
O00370 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
O00370 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
O00370 RNA5SP467-201ENST00000391274 118 ntBASIC1.68□□□□□ -2.14
O00370 RNA5SP475-201ENST00000410568 110 ntBASIC1.68□□□□□ -2.14
O00370 AL160004.2-201ENST00000432935 350 ntBASIC1.68□□□□□ -2.14
O00370 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms