Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 AC105029.1-201ENST00000520250 669 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 AL161670.1-201ENST00000554348 137 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 AC090617.3-201ENST00000573670 475 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 AC125232.2-201ENST00000592457 143 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 AP001485.1-201ENST00000604799 199 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 MIR1244-1-201ENST00000612829 85 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 MIR1244-3-201ENST00000635744 85 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 MIR1244-2-201ENST00000636449 85 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 MIR1244-4-202ENST00000636813 85 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 U6.108-201ENST00000637764 58 ntBASIC1.35□□□□□ -2.19
NPIPA2E9PIF3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 RNA5SP361-201ENST00000362686 118 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 SNORD81.2-201ENST00000365153 76 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 MIR329-1-201ENST00000385028 80 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 RPL21P1-201ENST00000399532 476 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 SNORD65B-201ENST00000459126 73 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 RNU7-34P-201ENST00000459394 64 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 RNU6-120P-201ENST00000516077 103 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AC022868.1-201ENST00000517767 391 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 MIR4709-201ENST00000577272 72 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AL359075.3-201ENST00000613288 217 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AC092794.2-201ENST00000620933 563 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 AC099654.5-201ENST00000636479 350 ntBASIC1.34□□□□□ -2.19
NPIPA2E9PIF3 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AC079140.2-201ENST00000506193 142 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AL357075.2-201ENST00000614906 189 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 AL669831.3-213ENST00000636676 183 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 TPTEP1-208ENST00000636884 213 ntBASIC1.33□□□□□ -2.2
NPIPA2E9PIF3 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 RNY1P10-201ENST00000363268 113 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 RNU6-99P-201ENST00000364721 107 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC027119.1-201ENST00000440877 241 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 UQCRBP2-201ENST00000447827 297 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC116353.2-201ENST00000505332 712 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 APOOP3-201ENST00000536787 586 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC023157.2-201ENST00000540596 141 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AL137100.2-201ENST00000555786 315 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC004584.2-201ENST00000570407 410 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC015688.6-201ENST00000577737 104 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC005899.2-201ENST00000584353 90 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AL929325.1-201ENST00000603096 117 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC122108.2-201ENST00000611946 526 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 U6.73-201ENST00000619194 103 ntBASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
NPIPA2E9PIF3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RNU6-1145P-201ENST00000384246 107 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RNU6-370P-201ENST00000411008 104 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 ELOCP21-201ENST00000412558 336 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RPS27P1-201ENST00000450552 247 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 Y_RNA.635-201ENST00000459041 101 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RPL31P58-201ENST00000469001 379 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RPS26P45-201ENST00000471748 340 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RPS27P22-201ENST00000478056 241 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 RPL17P19-201ENST00000489069 552 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC010469.2-201ENST00000496412 480 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 Y_RNA.691-201ENST00000516611 103 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC022432.1-201ENST00000595739 310 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC022217.4-201ENST00000604389 163 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 AC022306.2-201ENST00000617563 647 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NPIPA2E9PIF3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
NPIPA2E9PIF3 Y_RNA.166-201ENST00000363730 102 ntBASIC1.3□□□□□ -2.2
NPIPA2E9PIF3 MIR194-1-201ENST00000384892 85 ntBASIC1.3□□□□□ -2.2
NPIPA2E9PIF3 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
NPIPA2E9PIF3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms