Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AC093027.1-201ENST00000546698 429 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC084364.2-201ENST00000546924 395 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC004584.2-201ENST00000570407 410 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 MIR3198-2-201ENST00000577868 80 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 MIR548S-201ENST00000581352 82 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 MIR4713-201ENST00000582691 75 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC113139.1-201ENST00000605049 239 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC103810.8-201ENST00000607347 118 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AL132765.2-201ENST00000610812 351 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC025253.1-201ENST00000613623 543 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC104260.1-201ENST00000616660 539 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC008873.1-201ENST00000625051 138 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 snoZ196.1-201ENST00000625269 89 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 MIR338-201ENST00000636369 67 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 MIR1302-1-201ENST00000637932 143 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.58-201ENST00000362807 102 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.70-201ENST00000362886 110 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.154-201ENST00000363624 102 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RNY3P1-201ENST00000365085 102 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RNY3-201ENST00000365484 102 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.364-201ENST00000365532 101 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 SNORD116-29-201ENST00000384516 83 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RNU6-296P-201ENST00000384608 107 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 MIR329-1-201ENST00000385028 80 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RNU1-139P-201ENST00000391307 165 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AC009310.1-201ENST00000414414 451 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 NCOR1P3-201ENST00000420479 303 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 MRPS18CP6-201ENST00000423587 223 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 MTCYBP10-201ENST00000424905 650 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 EIF1P2-201ENST00000428233 350 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 MTND4P18-201ENST00000447010 465 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RNU7-169P-201ENST00000459456 61 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RPL17P19-201ENST00000489069 552 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AC093303.1-201ENST00000514549 295 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 RNA5SP437-201ENST00000517249 129 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AC025647.1-201ENST00000517879 253 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AC022254.1-201ENST00000567857 235 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AL355375.2-201ENST00000574825 175 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 AC112487.2-201ENST00000637950 304 ntBASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
NKX2-6A6NCS4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 RNU6-137P-201ENST00000363680 108 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 RNU6-318P-201ENST00000384283 103 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 RNY1P14-201ENST00000384426 108 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 MTCYBP4-201ENST00000401524 249 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC007098.1-201ENST00000420122 367 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC096644.2-201ENST00000429278 159 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC005002.2-201ENST00000438228 269 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 MIR2053-201ENST00000459295 91 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC090617.3-201ENST00000573670 475 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 MIR5690-201ENST00000583739 73 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AL078603.1-201ENST00000603824 313 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC010900.2-201ENST00000604508 210 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC084781.2-201ENST00000615568 161 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 AC087588.2-201ENST00000617667 426 ntBASIC1.22□□□□□ -2.21
NKX2-6A6NCS4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 U8.1-201ENST00000362843 134 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 SNORA4.2-201ENST00000365313 147 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 SNORA75.6-201ENST00000391318 127 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 RPL21P1-201ENST00000399532 476 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 MIR1253-201ENST00000408273 105 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 MIR1185-2-201ENST00000408687 86 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 RNU6-1156P-201ENST00000410365 100 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.632-201ENST00000459189 102 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 RNU6-221P-201ENST00000459541 99 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 AC005908.1-201ENST00000468701 347 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 RNU6-470P-201ENST00000515954 104 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 RNU2-34P-201ENST00000516534 121 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 AC005899.2-201ENST00000584353 90 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NKX2-6A6NCS4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NKX2-6A6NCS4 U3.8-201ENST00000363675 217 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms