Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-245P-201ENST00000384020 107 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 MIR559-201ENST00000385188 96 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 RNA5SP109-201ENST00000391010 116 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 MIR1185-2-201ENST00000408687 86 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC073910.1-201ENST00000445047 438 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-221P-201ENST00000459541 99 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC093303.1-201ENST00000514549 295 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 RNU7-128P-201ENST00000517247 62 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC004584.2-201ENST00000570407 410 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AL355375.2-201ENST00000574825 175 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 MIR4713-201ENST00000582691 75 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC113139.1-201ENST00000605049 239 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC104260.1-201ENST00000616660 539 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 AC104985.2-201ENST00000620598 500 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 MIR424-201ENST00000362227 98 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-1145P-201ENST00000384246 107 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 SNORA75.6-201ENST00000391318 127 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 MIR1287-201ENST00000408492 90 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 NCOR1P3-201ENST00000420479 303 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 HSPE1P9-201ENST00000440046 311 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 MTND4P18-201ENST00000447010 465 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 RNU1-98P-201ENST00000458992 160 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.632-201ENST00000459189 102 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 MIR2053-201ENST00000459295 91 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 RPL17P19-201ENST00000489069 552 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AL163195.1-201ENST00000496941 348 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 RNA5SP61-201ENST00000516453 100 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-966P-201ENST00000516479 104 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-107P-201ENST00000516643 102 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.718-201ENST00000517110 102 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC090617.3-201ENST00000573670 475 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 MIR548S-201ENST00000581352 82 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC005034.5-201ENST00000604219 466 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 U1.36-201ENST00000620684 176 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.05□□□□□ -2.24
TRAV40A0A0B4J280 AC010615.1-201ENST00000594254 1764 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-454P-201ENST00000364292 107 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.356-201ENST00000365475 113 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-926P-201ENST00000384075 107 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 MIR499A-201ENST00000384903 122 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 SNORA12.1-201ENST00000390873 148 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-700P-201ENST00000391043 107 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 AL355796.1-201ENST00000406706 323 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-1156P-201ENST00000410365 100 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 AC010154.1-201ENST00000425857 269 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 RPS27P1-201ENST00000450552 247 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 SNORD65B-201ENST00000459126 73 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-470P-201ENST00000515954 104 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 HSBP1P1-201ENST00000555205 166 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 SNORA77B-201ENST00000578179 125 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 AC078899.2-201ENST00000595282 212 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 AC016925.2-201ENST00000605108 242 ntBASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.04□□□□□ -2.24
TRAV40A0A0B4J280 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-1301P-201ENST00000362724 104 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 U3.8-201ENST00000363675 217 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-137P-201ENST00000363680 108 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-961P-201ENST00000363893 105 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-280P-201ENST00000364145 104 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 SNORA63D-201ENST00000364359 132 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-53P-201ENST00000365367 106 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.496-201ENST00000384444 101 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNY4P36-201ENST00000391116 96 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 MTCYBP4-201ENST00000401524 249 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 MTCYBP10-201ENST00000424905 650 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 HMGN1P7-201ENST00000491722 313 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-970P-201ENST00000516312 107 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 SNORA31.10-201ENST00000516482 106 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.683-201ENST00000516508 93 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-699P-201ENST00000517081 110 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AC023157.2-201ENST00000540596 141 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 7SK.7-201ENST00000603504 247 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AC022217.4-201ENST00000604389 163 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 RBM11P1-201ENST00000604951 799 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AL353149.1-201ENST00000610667 244 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AC011476.5-201ENST00000615594 130 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 AC138305.3-201ENST00000624988 240 ntBASIC1.03□□□□□ -2.24
TRAV40A0A0B4J280 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms