Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AC092436.3-201ENST00000511788 257 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AK6P2-201ENST00000549020 471 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 MIR4764-201ENST00000580680 88 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AC120024.3-201ENST00000603167 156 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AC018645.2-201ENST00000609151 472 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 MIR8087-201ENST00000612745 78 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-500P-201ENST00000362349 107 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-654P-201ENST00000364373 107 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 MIR487A-201ENST00000385009 80 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 AL139396.1-201ENST00000421137 167 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 MTND4LP16-201ENST00000440828 295 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 AL392103.1-201ENST00000447000 198 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 SNORA25.14-201ENST00000516481 132 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 RNU7-43P-201ENST00000516554 64 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 MIR7844-201ENST00000616161 122 ntBASIC-0.18□□□□□ -2.44
TRAV4A0A0B4J268 RNU4-41P-201ENST00000364426 143 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 MIR613-201ENST00000385248 95 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-700P-201ENST00000391043 107 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AL358176.2-201ENST00000425769 204 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AL137161.1-201ENST00000532231 390 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AC112693.2-201ENST00000556538 232 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 MIR4290-201ENST00000583807 95 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AL355073.2-201ENST00000612106 557 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 AC068137.4-201ENST00000638485 296 ntBASIC-0.19□□□□□ -2.44
TRAV4A0A0B4J268 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 SNORD115-8-201ENST00000363856 82 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 SNORD115-38-201ENST00000365037 82 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 MIR136-201ENST00000385207 82 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 MIR450B-201ENST00000401182 78 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 MIR1298-201ENST00000408783 112 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 AC098592.1-201ENST00000419352 333 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 PIGPP3-201ENST00000425307 415 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 MTND4P18-201ENST00000447010 465 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 RPL23AP75-201ENST00000491601 451 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-977P-201ENST00000516411 103 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 AL358944.1-201ENST00000528537 144 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 AC023442.1-201ENST00000531247 422 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 RBM11P1-201ENST00000604951 799 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 uc_338.16-201ENST00000621804 95 ntBASIC-0.2□□□□□ -2.44
TRAV4A0A0B4J268 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-606P-201ENST00000384721 111 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-376P-201ENST00000384731 106 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 MIR15B-201ENST00000385045 98 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-613P-201ENST00000410412 108 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 AC243428.1-201ENST00000421099 264 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 RPS3AP17-201ENST00000472594 777 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 AC107401.1-201ENST00000503426 685 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 SCOCP1-201ENST00000554676 349 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 AC007671.2-201ENST00000637344 619 ntBASIC-0.21□□□□□ -2.44
TRAV4A0A0B4J268 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 SNORD118-201ENST00000363593 134 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-784P-201ENST00000384330 106 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 AL049545.1-201ENST00000401856 572 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 MTND1P4-201ENST00000435196 415 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 SEPT7P4-201ENST00000437076 306 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 AC114811.1-201ENST00000507207 168 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 MIR548AO-201ENST00000579992 96 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 AC104408.1-201ENST00000605241 170 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 AC064836.2-201ENST00000609491 462 ntBASIC-0.22□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-369P-201ENST00000362515 102 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-727P-201ENST00000363592 107 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-716P-201ENST00000365621 103 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 MIR489-201ENST00000384923 84 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 MIR516B2-201ENST00000385190 85 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 SNORA40.4-201ENST00000390971 128 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 MIR1197-201ENST00000408818 88 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 MIR1302-7-201ENST00000408841 72 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 RNA5SP95-201ENST00000410319 137 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-195P-201ENST00000411352 109 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms