Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SUMO1P2-201ENST00000452524 304 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC097462.1-201ENST00000514125 324 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU7-129P-201ENST00000516128 62 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORA18.7-201ENST00000516910 131 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC133485.4-201ENST00000561835 220 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC008608.1-201ENST00000603910 127 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AL670379.3-201ENST00000605040 251 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC011921.3-201ENST00000605540 361 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR499B-201ENST00000636498 73 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-715P-201ENST00000365204 103 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORD115-7-201ENST00000365306 82 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-396P-201ENST00000365369 105 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-116P-201ENST00000384042 109 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORA8.3-201ENST00000384679 139 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 MT-TN-201ENST00000387400 73 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR938-201ENST00000401216 83 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 MTCO3P19-201ENST00000415864 321 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 AL355994.1-201ENST00000424379 260 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 PIGPP3-201ENST00000425307 415 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 RPS24P1-201ENST00000438550 371 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 MTCO2P29-201ENST00000465212 189 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 AC116353.3-201ENST00000511215 249 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 MTND1P8-201ENST00000571424 950 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 AC100830.2-201ENST00000581636 240 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 AC010525.2-201ENST00000590920 195 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 SCARNA4-201ENST00000629045 128 ntBASIC-0.59□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORA26-201ENST00000391286 122 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 AC243428.1-201ENST00000421099 264 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 MTCO2P23-201ENST00000425216 680 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORA25.17-201ENST00000517184 124 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 MIR3666-201ENST00000607845 111 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 MIR7107-201ENST00000611489 80 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 uc_338.36-201ENST00000622331 158 ntBASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.6□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-641P-201ENST00000384006 107 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 RNA5SP494-201ENST00000410653 129 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 MLLT10P1-201ENST00000418346 262 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 MTND1P26-201ENST00000440488 538 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORD123-201ENST00000459473 70 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-180P-201ENST00000516697 61 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU7-172P-201ENST00000517125 64 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 AL358944.1-201ENST00000528537 144 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 HIF1AP1-201ENST00000553642 175 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 RPL21P9-201ENST00000556149 474 ntBASIC-0.61□□□□□ -2.51
TRAV1-2A0A0B4J238 RNA5SP257-201ENST00000363023 116 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-179P-201ENST00000363350 107 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORD115-24-201ENST00000363528 82 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-674P-201ENST00000363831 107 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RNA5SP117-201ENST00000365294 118 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-413P-201ENST00000384115 107 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 MIR15B-201ENST00000385045 98 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORD75.1-201ENST00000408373 60 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AL353572.1-201ENST00000442490 417 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RPL39P34-201ENST00000477141 156 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 MTND1P5-201ENST00000517906 940 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AC022784.5-201ENST00000522241 437 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 MTATP6P15-201ENST00000527233 835 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AC068587.5-201ENST00000528506 175 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AP001180.6-201ENST00000584918 159 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 AC008507.2-201ENST00000588402 1176 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORD11B-201ENST00000607707 90 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 FTX_2.1-201ENST00000618816 94 ntBASIC-0.62□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 ERHP2-201ENST00000402323 299 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 MIR320B2-201ENST00000408479 138 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 AC010587.1-201ENST00000505809 469 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 SNORA14.1-201ENST00000516113 141 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 AC246785.4-201ENST00000605374 287 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 AC013244.3-201ENST00000605614 388 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 RN7SL660P-201ENST00000614852 299 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 MIR6828-201ENST00000636181 60 ntBASIC-0.63□□□□□ -2.51
TRAV1-2A0A0B4J238 MTND4P9-201ENST00000507819 1346 ntBASIC-0.64□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.64□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.64□□□□□ -2.51
TRAV1-2A0A0B4J238 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms