Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-57P-201ENST00000411348 103 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 POLR2KP2-201ENST00000438155 177 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 SERF1AP1-201ENST00000514575 187 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 RNU2-31P-201ENST00000516954 155 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 SDR42E1P4-201ENST00000620894 481 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 MTND5P6-201ENST00000422338 1798 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.188-201ENST00000363952 111 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 SNORD115-30-201ENST00000364117 82 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 RNU2-52P-201ENST00000410680 190 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 RNU2-38P-201ENST00000410856 79 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 RPL23AP3-201ENST00000453844 468 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 RPL39P38-201ENST00000467018 153 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 UBE2DNL-203ENST00000474922 222 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 RNU6-436P-201ENST00000516171 114 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 AC025647.1-201ENST00000517879 253 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 AC012433.1-201ENST00000588916 398 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 ZNF271P-202ENST00000465539 1970 ntBASIC2.57□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.307-201ENST00000365022 117 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 SNORD14D-201ENST00000384390 87 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 RNU1-148P-201ENST00000384472 162 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 AC008134.1-201ENST00000420943 193 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 RNU6-856P-201ENST00000516959 98 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 AC110588.1-201ENST00000559699 137 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 MIR3671-201ENST00000580455 88 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 AC006023.1-201ENST00000603944 259 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 AC037487.3-201ENST00000606668 112 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 AC013412.1-201ENST00000610687 192 ntBASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PCDHA3Q9Y5H8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.447-201ENST00000384184 113 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 MIR1262-201ENST00000408276 93 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 AC063976.3-201ENST00000426849 329 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 RNU1-131P-201ENST00000458943 161 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 AC010598.1-201ENST00000510378 103 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 MIR4319-201ENST00000577285 85 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 MIR4513-201ENST00000581077 86 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHA3Q9Y5H8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.352-201ENST00000365439 102 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.418-201ENST00000384029 102 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.478-201ENST00000384358 107 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AL031003.1-201ENST00000404229 172 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 MIR548H3-201ENST00000408771 118 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 SNORD65B-201ENST00000459126 73 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 RNU6-1271P-201ENST00000517049 105 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AC006435.5-201ENST00000624486 112 ntBASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PCDHA3Q9Y5H8 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 RNU6-1266P-201ENST00000362794 105 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.329-201ENST00000365209 107 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 AC016909.1-201ENST00000415916 166 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 MTND1P19-201ENST00000511780 315 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 SCARNA24.2-201ENST00000516968 130 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
PCDHA3Q9Y5H8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-324P-201ENST00000363957 106 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.416-201ENST00000384014 113 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.489-201ENST00000384410 101 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-160P-201ENST00000384591 107 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 MIR196B-201ENST00000384852 84 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-1248P-201ENST00000391096 64 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 AL355796.1-201ENST00000406706 323 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 AC024067.1-201ENST00000426199 223 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 MTCO1P5-201ENST00000433573 344 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms