Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR5695-201ENST00000579717 85 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 MZT1P2-201ENST00000604387 248 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 RBM11P1-201ENST00000604951 799 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 AC126177.8-201ENST00000618339 1015 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 AC092794.2-201ENST00000620933 563 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 AL669831.3-213ENST00000636676 183 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 MTND5P16-201ENST00000460269 1703 ntBASIC1.65□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-727P-201ENST00000363592 107 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 AC007098.1-201ENST00000420122 367 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 EIF1P2-201ENST00000428233 350 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 AL353997.1-201ENST00000432936 108 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 RPL17P19-201ENST00000489069 552 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 AC025647.1-201ENST00000517879 253 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 AC090617.3-201ENST00000573670 475 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-874P-201ENST00000362390 105 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-392P-201ENST00000364926 101 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR1185-2-201ENST00000408687 86 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 JTBP1-201ENST00000441314 247 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AC084364.2-201ENST00000546924 395 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR5690-201ENST00000583739 73 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 UBE2V2P2-201ENST00000587677 504 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AC113139.1-201ENST00000605049 239 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AC006001.4-201ENST00000622243 395 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 MTND5P35-201ENST00000557537 1720 ntBASIC1.63□□□□□ -2.15
PCDHGA1Q9Y5H4 AL391987.6-201ENST00000305671 199 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 SNORA72.1-201ENST00000363485 129 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-1188P-201ENST00000363795 107 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-370P-201ENST00000411008 104 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 AC004965.1-201ENST00000413033 213 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 AC016909.1-201ENST00000415916 166 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 AC008134.1-201ENST00000420943 193 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 HMGN2P34-201ENST00000437647 269 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 RPL26P26-201ENST00000480251 434 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 AC093023.1-201ENST00000547375 507 ntBASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PCDHGA1Q9Y5H4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.142-201ENST00000363491 102 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR329-1-201ENST00000385028 80 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 RPL23AP50-201ENST00000434149 455 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 HSPE1P9-201ENST00000440046 311 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 MTND4P18-201ENST00000447010 465 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU7-87P-201ENST00000459343 62 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 CYCSP23-201ENST00000519781 313 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 APOOP3-201ENST00000536787 586 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 AC004584.2-201ENST00000570407 410 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR4801-201ENST00000582704 82 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 AC005730.3-201ENST00000583067 366 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 AC125232.2-201ENST00000592457 143 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 AC025253.1-201ENST00000613623 543 ntBASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDHGA1Q9Y5H4 SNORA63D-201ENST00000364359 132 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-310P-201ENST00000384655 107 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 SNORA75.6-201ENST00000391318 127 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR1253-201ENST00000408273 105 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.646-201ENST00000410980 101 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 AC092423.1-201ENST00000430165 186 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 AC245517.4-201ENST00000448601 281 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 AC006026.1-201ENST00000444025 1803 ntBASIC1.6□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.59□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-99P-201ENST00000364721 107 ntBASIC1.59□□□□□ -2.15
PCDHGA1Q9Y5H4 Y_RNA.303-201ENST00000364998 94 ntBASIC1.59□□□□□ -2.15
PCDHGA1Q9Y5H4 RNU6-417P-201ENST00000384712 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms