Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RPS27P22-201ENST00000478056 241 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 OR9P1P-201ENST00000496431 281 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 RNU7-12P-201ENST00000516030 62 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 PIGPP4-201ENST00000584447 307 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AL391903.3-201ENST00000612158 163 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 MIR8070-201ENST00000616510 88 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AC073534.2-201ENST00000620377 381 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AC006504.8-201ENST00000621046 635 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AC121333.1-201ENST00000567488 2709 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 Y_RNA.378-201ENST00000365652 113 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 MIR499A-201ENST00000384903 122 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 MIR32-201ENST00000384965 70 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 MIR487A-201ENST00000385009 80 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC093019.1-201ENST00000443135 252 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 MTND4P18-201ENST00000447010 465 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC079354.2-201ENST00000453523 154 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 SNORD65B-201ENST00000459126 73 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-261P-201ENST00000459506 102 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 RPS29P1-201ENST00000465274 159 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-341P-201ENST00000516973 96 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC022868.1-201ENST00000517767 391 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AP002004.2-201ENST00000531656 154 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AK6P2-201ENST00000549020 471 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC026371.1-201ENST00000551867 419 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 MIR6504-201ENST00000613520 61 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 Z69908.1-201ENST00000622603 247 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 MTND4P12-201ENST00000498999 1377 ntBASIC0.54□□□□□ -2.32
RHBDD3Q9Y3P4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 SNORD50.1-201ENST00000362987 71 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-873P-201ENST00000363833 107 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 Y_RNA.184-201ENST00000363884 108 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 RNU4-12P-201ENST00000365233 139 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-17P-201ENST00000384245 107 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-18P-201ENST00000384527 107 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AL590002.1-201ENST00000406554 418 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 U7.7-201ENST00000459276 60 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AC097462.1-201ENST00000514125 324 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 SNORD111.1-201ENST00000516421 86 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AL118558.2-201ENST00000556294 238 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 MIR4528-201ENST00000577763 90 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AL078603.1-201ENST00000603824 313 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AC007684.1-201ENST00000609671 477 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
RHBDD3Q9Y3P4 AC023934.1-201ENST00000574529 2389 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 Y_RNA.1-201ENST00000352915 104 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 Y_RNA.100-201ENST00000363141 102 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 Y_RNA.415-201ENST00000384012 112 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 RNU6-541P-201ENST00000384709 110 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AL035398.1-201ENST00000430869 322 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AC010469.2-201ENST00000496412 480 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 RNU6-1038P-201ENST00000516516 104 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AC027288.2-201ENST00000553028 243 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AC073648.5-201ENST00000603502 305 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AC087752.4-201ENST00000605911 462 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 AC092807.2-201ENST00000609367 243 ntBASIC0.52□□□□□ -2.33
RHBDD3Q9Y3P4 RN7SKP142-201ENST00000411236 328 ntBASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 AC093303.1-201ENST00000514549 295 ntBASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 RNU6-1332P-201ENST00000516666 104 ntBASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 RNU7-172P-201ENST00000517125 64 ntBASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 MIR4452-201ENST00000583004 71 ntBASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 7SK.7-201ENST00000603504 247 ntBASIC0.51□□□□□ -2.33
RHBDD3Q9Y3P4 SNORD113-7-201ENST00000363762 77 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 Y_RNA.179-201ENST00000363844 90 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 Y_RNA.296-201ENST00000364930 108 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 RNU6-348P-201ENST00000384386 107 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 RNU6-159P-201ENST00000391080 106 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AL353193.1-201ENST00000421444 268 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 DAP3P1-201ENST00000441522 278 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 RPS3AP17-201ENST00000472594 777 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AC083798.1-201ENST00000472671 131 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AC091179.3-201ENST00000474761 144 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 RNU6-415P-201ENST00000516252 97 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 RNA5SP220-201ENST00000516298 104 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AC027419.1-201ENST00000522976 328 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AL358944.1-201ENST00000528537 144 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 AC023157.2-201ENST00000540596 141 ntBASIC0.5□□□□□ -2.33
RHBDD3Q9Y3P4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms