Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC037487.3-201ENST00000606668 112 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 RNA5SP289-201ENST00000362332 137 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-944P-201ENST00000364023 107 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 SNORA20.1-201ENST00000364790 130 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-102P-201ENST00000384485 104 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 MTND4LP30-201ENST00000454092 297 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 AC090515.1-201ENST00000465295 476 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 RNU1-117P-201ENST00000517041 158 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 MIR4524B-201ENST00000581569 115 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 MIR4769-201ENST00000584126 77 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 AC090425.1-201ENST00000610007 140 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 AC004467.1-201ENST00000615678 330 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 AC006001.4-201ENST00000622243 395 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 AC127459.3-201ENST00000624328 466 ntBASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX2IPQ9Y2D8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.16-201ENST00000362421 102 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.331-201ENST00000365267 102 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 RNA5SP240-201ENST00000365355 128 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.352-201ENST00000365439 102 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-326P-201ENST00000365480 107 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.416-201ENST00000384014 113 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 SNORA67.2-201ENST00000384300 149 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.569-201ENST00000384749 103 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 MIR504-201ENST00000385065 83 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AL161788.1-201ENST00000441805 169 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AC005042.3-201ENST00000453230 174 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 SERF1AP1-201ENST00000514575 187 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1098P-201ENST00000516772 96 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AC021269.2-201ENST00000532318 330 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 MIR4648-201ENST00000580107 72 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 MIR3668-201ENST00000582138 75 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AC005357.1-201ENST00000588399 301 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 AL590240.4-201ENST00000616908 390 ntBASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSX2IPQ9Y2D8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.286-201ENST00000364813 102 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 SNORD87-201ENST00000364849 89 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-234P-201ENST00000365229 104 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.552-201ENST00000384665 112 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 MIR586-201ENST00000385035 97 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 MIR95-201ENST00000385072 81 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 MIR300-201ENST00000401138 83 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNA5SP504-201ENST00000410676 117 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU2-63P-201ENST00000410792 194 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU7-14P-201ENST00000459331 62 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 snoU13.15-201ENST00000459407 104 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 HMGB3P17-201ENST00000504195 649 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU2-31P-201ENST00000516954 155 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 SCARNA24.2-201ENST00000516968 130 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-388P-201ENST00000517012 105 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-389P-201ENST00000517048 105 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 AC008749.1-201ENST00000597650 306 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 AC008873.1-201ENST00000625051 138 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1305P-201ENST00000364353 104 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.477-201ENST00000384352 108 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1026P-201ENST00000384465 108 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 SNORA80E-201ENST00000384744 137 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 RNU2-54P-201ENST00000410299 190 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 TOMM22P2-201ENST00000430735 237 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 MTND1P19-201ENST00000511780 315 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 MIR449C-201ENST00000516047 92 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.680-201ENST00000516441 93 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 IGKV3-31-201ENST00000523109 329 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 AC055872.1-201ENST00000570978 278 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 AC006380.1-201ENST00000603598 186 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 AC091932.3-201ENST00000624223 323 ntBASIC2.59□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.20-201ENST00000362479 113 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.60-201ENST00000362831 98 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.101-201ENST00000363154 102 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 RNU6-546P-201ENST00000383991 107 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 RN7SKP223-201ENST00000410582 62 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 POLR2KP2-201ENST00000438155 177 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms