Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.530-201ENST00000384587 101 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 MIR548F1-201ENST00000408667 84 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AC005002.2-201ENST00000438228 269 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 RPL39P38-201ENST00000467018 153 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AC011352.1-201ENST00000512300 793 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 RNU6-256P-201ENST00000516747 97 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH9Q9ULB4 POLR3GP2-201ENST00000588366 668 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 AL390123.1-201ENST00000603216 237 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 MIR3688-2-201ENST00000636963 87 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 SNORD87-201ENST00000364849 89 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.414-201ENST00000384011 101 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 RNU6-831P-201ENST00000384548 107 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 MIR153-2-201ENST00000385225 87 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 MRPL42P3-201ENST00000401492 326 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 MIR1185-2-201ENST00000408687 86 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 ZNF885P-201ENST00000420174 1098 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AC245047.3-201ENST00000429428 127 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.06□□□□□ -2.24
CDH9Q9ULB4 DAP3P1-201ENST00000441522 278 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 RNU7-128P-201ENST00000517247 62 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AL137100.2-201ENST00000555786 315 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AC004584.2-201ENST00000570407 410 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AC022432.1-201ENST00000595739 310 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AC136443.5-201ENST00000603741 370 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 AC068647.2-201ENST00000637380 353 ntBASIC1.06□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.9-201ENST00000362354 101 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNU6-137P-201ENST00000363680 108 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNU6-873P-201ENST00000363833 107 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNA5SP247-201ENST00000411181 105 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 TRBVA-201ENST00000498804 316 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNU6-1314P-201ENST00000517139 104 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 AC027288.2-201ENST00000553028 243 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 U4.5-201ENST00000617137 123 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 U6.73-201ENST00000619194 103 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 MTND4P12-201ENST00000498999 1377 ntBASIC1.05□□□□□ -2.24
CDH9Q9ULB4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.100-201ENST00000363141 102 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 RNU4-12P-201ENST00000365233 139 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 SNORD116-11-201ENST00000383882 92 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 RNU6-1215P-201ENST00000384441 102 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 RNU6-541P-201ENST00000384709 110 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 RNU6-440P-201ENST00000390882 105 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 SNORD115-47-201ENST00000391226 86 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 RNU6-864P-201ENST00000516256 108 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AK6P2-201ENST00000549020 471 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 AC068137.4-201ENST00000638485 296 ntBASIC1.04□□□□□ -2.24
CDH9Q9ULB4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.301-201ENST00000364990 103 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 MIR517A-201ENST00000385001 87 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CDH9Q9ULB4 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 MIR1287-201ENST00000408492 90 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.03□□□□□ -2.24
CDH9Q9ULB4 AC069439.1-201ENST00000494739 167 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 ACA59.1-201ENST00000515966 143 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 SNORD116-28-201ENST00000516123 91 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 RNU7-99P-201ENST00000516271 62 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 RNU6-113P-201ENST00000516653 101 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 FRG2DP-202ENST00000566967 323 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 MIR5696-201ENST00000578474 85 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.03□□□□□ -2.24
CDH9Q9ULB4 AC012557.2-201ENST00000605919 418 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 AL513423.1-201ENST00000621695 132 ntBASIC1.03□□□□□ -2.24
CDH9Q9ULB4 RNU6-727P-201ENST00000363592 107 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.02□□□□□ -2.25
CDH9Q9ULB4 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms