Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 RNU6-1266P-201ENST00000362794 105 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 MIR222-201ENST00000384992 110 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 MIR517A-201ENST00000385001 87 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 RNU6-908P-201ENST00000410160 94 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 RAB28P5-201ENST00000427490 651 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 RNU7-66P-201ENST00000459469 62 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 RPL30P10-201ENST00000488148 337 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
NUP50Q9UKX7 RNU6-1281P-201ENST00000516223 105 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 UBL5P4-201ENST00000562584 236 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 DISC2.1-201ENST00000612827 205 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AL138726.1-201ENST00000614873 333 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AC073349.3-201ENST00000617616 186 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AC009248.2-201ENST00000619826 254 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 MIR6734-201ENST00000621166 68 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 AL513423.1-201ENST00000621695 132 ntBASIC0.92□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 RNU1-93P-201ENST00000364704 169 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 RNU6-483P-201ENST00000384088 108 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 RNU6-541P-201ENST00000384709 110 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 RNU6-159P-201ENST00000391080 106 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 MTCO3P18-201ENST00000440206 761 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 DAP3P1-201ENST00000441522 278 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 HMGN2P26-201ENST00000463169 339 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC107401.1-201ENST00000503426 685 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC027419.1-201ENST00000522976 328 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC011604.1-201ENST00000545978 196 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 MIR4778-201ENST00000577635 80 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AL513534.2-201ENST00000603836 250 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 AC092954.2-201ENST00000609103 430 ntBASIC0.91□□□□□ -2.26
NUP50Q9UKX7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
NUP50Q9UKX7 RNU6-137P-201ENST00000363680 108 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 RNU4-76P-201ENST00000364509 141 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 RNU6-793P-201ENST00000384233 104 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 MIR660-201ENST00000385235 97 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 RNU6-910P-201ENST00000390844 107 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP50Q9UKX7 AC048334.1-201ENST00000477975 159 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 ACA59.1-201ENST00000515966 143 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.9□□□□□ -2.27
NUP50Q9UKX7 MIR4438-201ENST00000585271 93 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 AL162413.1-201ENST00000603198 110 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.9□□□□□ -2.27
NUP50Q9UKX7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.51-201ENST00000362725 102 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.135-201ENST00000363439 95 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.256-201ENST00000364594 104 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 RNU6-17P-201ENST00000384245 107 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 SNORD116-1-201ENST00000384335 95 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 RNU6-18P-201ENST00000384527 107 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 STAG3L5P-204ENST00000443759 179 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 RNU7-94P-201ENST00000459576 63 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 AC023157.2-201ENST00000540596 141 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP50Q9UKX7 MIR3672-201ENST00000584290 82 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 FAM106DP-201ENST00000586416 501 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 AL162424.1-201ENST00000602325 221 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 AC019193.3-201ENST00000609144 554 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.89□□□□□ -2.27
NUP50Q9UKX7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.89□□□□□ -2.27
NUP50Q9UKX7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.88□□□□□ -2.27
NUP50Q9UKX7 RNU6-451P-201ENST00000362921 107 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 Y_RNA.179-201ENST00000363844 90 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 RNU6-280P-201ENST00000364145 104 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.88□□□□□ -2.27
NUP50Q9UKX7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.88□□□□□ -2.27
NUP50Q9UKX7 MTND4P18-201ENST00000447010 465 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.88□□□□□ -2.27
NUP50Q9UKX7 SNORD65B-201ENST00000459126 73 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 TRBVA-201ENST00000498804 316 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 AC105758.1-201ENST00000506038 399 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 RN7SKP49-201ENST00000516675 260 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 RNU6-256P-201ENST00000516747 97 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 APOOP3-201ENST00000536787 586 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 PIGPP4-201ENST00000584447 307 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.88□□□□□ -2.27
NUP50Q9UKX7 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 RNU4-79P-201ENST00000362764 141 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 MIR489-201ENST00000384923 84 ntBASIC0.87□□□□□ -2.27
NUP50Q9UKX7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms