Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AC092991.1-201ENST00000477176 376 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AC093852.1-201ENST00000503587 266 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-1088P-201ENST00000516850 104 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AC027288.2-201ENST00000553028 243 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 MIR4790-201ENST00000577799 79 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 MIR6128-201ENST00000615528 109 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 AC006001.4-201ENST00000622243 395 ntBASIC1.48□□□□□ -2.17
NPC1L1Q9UHC9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNA5SP325-201ENST00000363756 130 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 Y_RNA.301-201ENST00000364990 103 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-159P-201ENST00000391080 106 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 HMGN2P34-201ENST00000437647 269 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 SNORD5.1-201ENST00000458800 75 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-221P-201ENST00000459541 99 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RPL31P58-201ENST00000469001 379 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RPL26P26-201ENST00000480251 434 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC011352.1-201ENST00000512300 793 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU4-49P-201ENST00000516080 140 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AF235103.2-201ENST00000525753 346 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC068790.6-201ENST00000602558 258 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AL050343.2-201ENST00000607338 280 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-873P-201ENST00000363833 107 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-595P-201ENST00000363944 107 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-1240P-201ENST00000365155 104 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-793P-201ENST00000384233 104 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 MIR598-201ENST00000384868 97 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 MIR487A-201ENST00000385009 80 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AL356776.1-201ENST00000406574 447 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 SDAD1P3-201ENST00000427380 333 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6-329P-201ENST00000459618 107 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RPL30P10-201ENST00000488148 337 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RN7SKP179-201ENST00000516126 217 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 Y_RNA.706-201ENST00000516933 99 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC100812.1-201ENST00000607622 580 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC007014.2-201ENST00000615581 479 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 AC009248.2-201ENST00000619826 254 ntBASIC1.47□□□□□ -2.17
NPC1L1Q9UHC9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-950P-201ENST00000384651 107 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 RNA5SP323-201ENST00000391094 133 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 MIR1285-1-201ENST00000408593 84 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-1148P-201ENST00000410992 104 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 COX6CP10-201ENST00000416832 224 ntBASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.46□□□□□ -2.18
NPC1L1Q9UHC9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.72-201ENST00000362894 103 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.86-201ENST00000363020 111 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-192P-201ENST00000391253 100 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 RPL30P16-201ENST00000419341 429 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 USP9YP30-201ENST00000430729 455 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 snoU13.27-201ENST00000459278 104 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.682-201ENST00000516457 100 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 RNA5SP437-201ENST00000517249 129 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 AC025647.1-201ENST00000517879 253 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 AL121579.1-201ENST00000555129 305 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
NPC1L1Q9UHC9 MTND4P12-201ENST00000498999 1377 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-417P-201ENST00000384712 107 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 MTND3P8-201ENST00000412909 339 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 AC074085.1-201ENST00000413598 418 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 AC093303.1-201ENST00000514549 295 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 RNU1-142P-201ENST00000516682 145 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 CYCSP23-201ENST00000519781 313 ntBASIC1.44□□□□□ -2.18
NPC1L1Q9UHC9 AC100821.1-201ENST00000523153 2479 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 RNU6-271P-201ENST00000363858 105 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.43□□□□□ -2.18
NPC1L1Q9UHC9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms