Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 MTCYBP10-201ENST00000424905 650 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 EIF1P2-201ENST00000428233 350 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 MIR2053-201ENST00000459295 91 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 AC093303.1-201ENST00000514549 295 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 MIR3198-2-201ENST00000577868 80 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 snoZ196.1-201ENST00000625269 89 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 MIR338-201ENST00000636369 67 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 WWP1P1-201ENST00000466609 2769 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNA5SP361-201ENST00000362686 118 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.364-201ENST00000365532 101 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 MIR548B-201ENST00000385247 97 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 USP9YP16-201ENST00000430287 407 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 USP9YP23-201ENST00000455085 407 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 SNORD13-201ENST00000459299 104 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNU6-221P-201ENST00000459541 99 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNU6-699P-201ENST00000517081 110 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 SUB1P3-201ENST00000564581 315 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 AL357075.2-201ENST00000614906 189 ntBASIC2.05□□□□□ -2.08
SMC4Q9NTJ3 RNU1-17P-201ENST00000363022 152 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 U3.8-201ENST00000363675 217 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 RNU1-96P-201ENST00000364163 162 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.419-201ENST00000384041 102 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 RNU6-793P-201ENST00000384233 104 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 MIR520A-201ENST00000384862 85 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.604-201ENST00000410574 102 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 AC008134.1-201ENST00000420943 193 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 AC245047.4-201ENST00000433189 144 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 AC069257.2-201ENST00000441819 155 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 CHEK2P4-201ENST00000450340 246 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 RNU7-152P-201ENST00000458982 64 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.675-201ENST00000516389 149 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 AC093023.1-201ENST00000547375 507 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 C8orf59P2-201ENST00000603441 271 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 AC104985.2-201ENST00000620598 500 ntBASIC2.04□□□□□ -2.08
SMC4Q9NTJ3 SNORA63D-201ENST00000364359 132 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 SNORA72.2-201ENST00000365028 127 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 RNU6-318P-201ENST00000384283 103 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 MIR329-1-201ENST00000385028 80 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 SNORA67.5-201ENST00000391036 107 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 RNU7-169P-201ENST00000459456 61 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC008834.1-201ENST00000511612 175 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC090617.3-201ENST00000573670 475 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC010999.1-201ENST00000611856 324 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.03□□□□□ -2.08
SMC4Q9NTJ3 AC010615.1-201ENST00000594254 1764 ntBASIC2.03□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.579-201ENST00000390939 94 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 RNA5SP247-201ENST00000411181 105 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 RNU6-57P-201ENST00000411348 103 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 AC007098.1-201ENST00000420122 367 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 AC096644.2-201ENST00000429278 159 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 RNU6-307P-201ENST00000516743 106 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 RNU6-264P-201ENST00000517134 104 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 AC022868.1-201ENST00000517767 391 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 AC126177.8-201ENST00000618339 1015 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 AL008636.1-201ENST00000625038 1018 ntBASIC2.02□□□□□ -2.09
SMC4Q9NTJ3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 MTND5P35-201ENST00000557537 1720 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.187-201ENST00000363918 113 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 RNU6-1040P-201ENST00000383974 107 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 MIR30A-201ENST00000385092 71 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 MIR1185-2-201ENST00000408687 86 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 EBAG9P1-201ENST00000418955 543 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms