Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 MIR4659A-201ENST00000580269 81 ntBASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 MIR3171-201ENST00000584270 74 ntBASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 AC044792.1-201ENST00000593294 196 ntBASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 AL162373.1-201ENST00000620433 407 ntBASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.98□□□□□ -2.09
SLC6A13Q9NSD5 AC091812.1-201ENST00000432235 1948 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 RNU6-961P-201ENST00000363893 105 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 SNORA22B-201ENST00000383876 138 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 MIR1253-201ENST00000408273 105 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 RNA5SP475-201ENST00000410568 110 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AC099677.2-201ENST00000436385 175 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 MTCYBP6-201ENST00000441810 138 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AL163540.1-201ENST00000485382 386 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 RNVU1-2-201ENST00000516326 135 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AP002001.1-203ENST00000534002 267 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 MIR3684-201ENST00000579779 74 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AC240442.1-201ENST00000616055 283 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SLC6A13Q9NSD5 RNU6-862P-201ENST00000362804 105 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RNU4-50P-201ENST00000364361 141 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 SNORD14.1-201ENST00000365609 90 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-1227P-201ENST00000383981 107 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AL023284.1-201ENST00000403956 276 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 MTND1P14-201ENST00000427400 950 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RPL23AP3-201ENST00000453844 468 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC040926.1-201ENST00000530195 238 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC022432.1-201ENST00000595739 310 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AL356055.1-201ENST00000602528 446 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AL390123.1-201ENST00000603216 237 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC069114.2-201ENST00000604699 304 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AL121655.1-201ENST00000605811 308 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC011476.5-201ENST00000615594 130 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 AC010205.1-201ENST00000616668 449 ntBASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SLC6A13Q9NSD5 RNU1-96P-201ENST00000364163 162 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 AC117470.1-201ENST00000381974 330 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.424-201ENST00000384063 103 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 MIR515-2-201ENST00000384883 83 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 MIR515-1-201ENST00000384884 83 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 MRPL42P3-201ENST00000401492 326 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 RNA5SP425-201ENST00000410336 112 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 AL135786.1-201ENST00000415892 214 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-1153P-201ENST00000516760 105 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SLC6A13Q9NSD5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-454P-201ENST00000364292 107 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.458-201ENST00000384240 102 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 SNORA8-201ENST00000384574 139 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-417P-201ENST00000384712 107 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 RN7SKP192-201ENST00000411291 327 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AC005534.2-201ENST00000431047 433 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 snoU13.26-201ENST00000459452 105 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 RPS29P21-201ENST00000496272 170 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 SUB1P4-201ENST00000566062 339 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AC091932.3-201ENST00000624223 323 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 AC006435.5-201ENST00000624486 112 ntBASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SLC6A13Q9NSD5 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.216-201ENST00000364205 93 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.230-201ENST00000364348 109 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 SNORA72.2-201ENST00000365028 127 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.645-201ENST00000391229 102 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 SNORD65B-201ENST00000459126 73 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms