Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.52□□□□□ -2.17
HPS4Q9NQG7 RNU6-1188P-201ENST00000363795 107 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.319-201ENST00000365138 92 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.356-201ENST00000365475 113 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.646-201ENST00000410980 101 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 CST2P1-201ENST00000425770 87 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 USMG5P1-201ENST00000425964 177 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC074290.1-201ENST00000448883 135 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 HMGN1P13-201ENST00000505795 138 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 RNU1-117P-201ENST00000517041 158 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 RNA5SP437-201ENST00000517249 129 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.52□□□□□ -2.17
HPS4Q9NQG7 FRG2DP-202ENST00000566967 323 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.52□□□□□ -2.17
HPS4Q9NQG7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AL078596.1-201ENST00000624856 447 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 AC008873.1-201ENST00000625051 138 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
HPS4Q9NQG7 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.405-201ENST00000383979 100 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.451-201ENST00000384200 100 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 SNORD116-29-201ENST00000384516 83 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.524-201ENST00000384564 100 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU6-310P-201ENST00000384655 107 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.561-201ENST00000384694 100 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU6-1009P-201ENST00000390996 107 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU2-7P-201ENST00000410794 178 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU6-57P-201ENST00000411348 103 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 EBAG9P1-201ENST00000418955 543 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 MTCO3P10-201ENST00000455912 772 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 SNORA25.14-201ENST00000516481 132 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 AL590705.4-201ENST00000532209 134 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
HPS4Q9NQG7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.51□□□□□ -2.17
HPS4Q9NQG7 AC027288.2-201ENST00000553028 243 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 UBL5P4-201ENST00000562584 236 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 AL355375.2-201ENST00000574825 175 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 AL355802.3-201ENST00000607571 545 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 PISRT1.1-201ENST00000616930 107 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 AC006001.4-201ENST00000622243 395 ntBASIC1.51□□□□□ -2.17
HPS4Q9NQG7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
HPS4Q9NQG7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
HPS4Q9NQG7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HPS4Q9NQG7 RNU6-874P-201ENST00000362390 105 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-222P-201ENST00000362438 107 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-137P-201ENST00000363680 108 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-414P-201ENST00000363705 104 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 SNORA63D-201ENST00000364359 132 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.263-201ENST00000364659 114 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-17P-201ENST00000384245 107 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-18P-201ENST00000384527 107 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-541P-201ENST00000384709 110 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNA5SP504-201ENST00000410676 117 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 AC093019.1-201ENST00000443135 252 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 AP000870.1-201ENST00000472927 406 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RPL26P26-201ENST00000480251 434 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 MIR5701-3-201ENST00000578890 82 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 MIR5701-1-201ENST00000585138 82 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 MIR5701-2-201ENST00000615634 82 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HPS4Q9NQG7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HPS4Q9NQG7 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
HPS4Q9NQG7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HPS4Q9NQG7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.58-201ENST00000362807 102 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RNY1P16-201ENST00000363063 111 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.154-201ENST00000363624 102 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RNU6-873P-201ENST00000363833 107 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RNY3P1-201ENST00000365085 102 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RNY3-201ENST00000365484 102 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RNU6-890P-201ENST00000384121 107 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 Y_RNA.490-201ENST00000384413 102 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.49□□□□□ -2.17
HPS4Q9NQG7 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 MTND3P23-201ENST00000431980 347 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 HMGN2P34-201ENST00000437647 269 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RPL30P15-201ENST00000457129 321 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 FGF7P4-201ENST00000509595 295 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.49□□□□□ -2.17
HPS4Q9NQG7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 7SK.7-201ENST00000603504 247 ntBASIC1.49□□□□□ -2.17
HPS4Q9NQG7 AC025253.1-201ENST00000613623 543 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms