Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 AL163540.1-201ENST00000485382 386 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 AC022493.2-201ENST00000506122 481 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 AC025647.1-201ENST00000517879 253 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 AC091144.1-201ENST00000519573 138 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 MIR5690-201ENST00000583739 73 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 AC012493.3-201ENST00000604494 112 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 AC104260.1-201ENST00000616660 539 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 MIR1302-1-201ENST00000637932 143 ntBASIC1.66□□□□□ -2.14
RPF1Q9H9Y2 Y_RNA.287-201ENST00000364853 94 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 RPL30P15-201ENST00000457129 321 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 RNU6-221P-201ENST00000459541 99 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 RNU6-307P-201ENST00000516743 106 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 AC015720.1-201ENST00000565251 277 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 AL353149.1-201ENST00000610667 244 ntBASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
RPF1Q9H9Y2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 U3.8-201ENST00000363675 217 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.387-201ENST00000383918 102 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 RNU6-318P-201ENST00000384283 103 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.529-201ENST00000384586 119 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 MIR1185-2-201ENST00000408687 86 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 AC007098.1-201ENST00000420122 367 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 MTND5P20-201ENST00000448677 143 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 AC074290.1-201ENST00000448883 135 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.653-201ENST00000459091 95 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 FGF7P4-201ENST00000509595 295 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 AC084364.2-201ENST00000546924 395 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 AL355375.2-201ENST00000574825 175 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 AC087588.2-201ENST00000617667 426 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 RNU6-1297P-201ENST00000384415 104 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 RNU6-417P-201ENST00000384712 107 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 MRPS18CP6-201ENST00000423587 223 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 RNA5SP437-201ENST00000517249 129 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AC022868.1-201ENST00000517767 391 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 SUB1P3-201ENST00000564581 315 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AC069114.2-201ENST00000604699 304 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AC025253.1-201ENST00000613623 543 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 MIR8074-201ENST00000615081 81 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.63□□□□□ -2.15
RPF1Q9H9Y2 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 RNU6-879P-201ENST00000364328 108 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 RNY4P36-201ENST00000391116 96 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 RNA5SP467-201ENST00000391274 118 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 RNU6-1156P-201ENST00000410365 100 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 ELOCP21-201ENST00000412558 336 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 CST2P1-201ENST00000425770 87 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 ELOCP24-201ENST00000456370 334 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 AC105758.1-201ENST00000506038 399 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 AC025465.3-201ENST00000510570 311 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 RNU6-470P-201ENST00000515954 104 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.702-201ENST00000516843 96 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.718-201ENST00000517110 102 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 AC093027.1-201ENST00000546698 429 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 AC112487.2-201ENST00000637950 304 ntBASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
RPF1Q9H9Y2 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 RNY3P11-201ENST00000364153 102 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.259-201ENST00000364619 101 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.263-201ENST00000364659 114 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.356-201ENST00000365475 113 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 Y_RNA.577-201ENST00000384794 101 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 MIR559-201ENST00000385188 96 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 RNU6-1009P-201ENST00000390996 107 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 MTCYBP4-201ENST00000401524 249 ntBASIC1.61□□□□□ -2.15
RPF1Q9H9Y2 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms