Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 7SK.7-201ENST00000603504 247 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 MIR6078-201ENST00000611069 100 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AL157834.3-201ENST00000615543 103 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 SNORD116-11-201ENST00000383882 92 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 RNU6-332P-201ENST00000391193 108 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 RNU4-62P-201ENST00000410125 130 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 AL121890.1-201ENST00000435457 205 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 MTATP6P13-201ENST00000438531 667 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 STAG3L5P-204ENST00000443759 179 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 RPS27P22-201ENST00000478056 241 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 AC010469.2-201ENST00000496412 480 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 RNU7-175P-201ENST00000515915 61 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 AC023157.2-201ENST00000540596 141 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 MIR4778-201ENST00000577635 80 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 AC010999.1-201ENST00000611856 324 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 MIR6079-201ENST00000635807 62 ntBASIC0.76□□□□□ -2.29
SLIRPQ9GZT3 RNU6-424P-201ENST00000384367 105 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 MTCO3P19-201ENST00000415864 321 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 HSPE1P13-201ENST00000451143 297 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 AC097462.1-201ENST00000514125 324 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 SNORD79.1-201ENST00000516069 84 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 RNA5SP168-201ENST00000516642 112 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 MIR4661-201ENST00000582720 75 ntBASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.75□□□□□ -2.29
SLIRPQ9GZT3 RNU6-281P-201ENST00000384212 103 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 RNA5SP213-201ENST00000391031 106 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 RNU11-5P-201ENST00000391216 129 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 RNU1-139P-201ENST00000391307 165 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 MIR1261-201ENST00000408659 82 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 BTF3P4-201ENST00000418852 495 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AL591806.2-201ENST00000433122 173 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AC002429.1-201ENST00000437672 148 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AC087343.1-201ENST00000477341 475 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 RNU6-917P-201ENST00000516294 104 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 RNU7-28P-201ENST00000516759 62 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AL590705.4-201ENST00000532209 134 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 AC080078.2-201ENST00000603766 501 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
SLIRPQ9GZT3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 RNU6-595P-201ENST00000363944 107 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 SNORA2.2-201ENST00000365473 135 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 MIR562-201ENST00000384894 95 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 SNORA17.3-201ENST00000391159 129 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 CALM2P4-201ENST00000430810 426 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 OR9P1P-201ENST00000496431 281 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 AC027419.1-201ENST00000522976 328 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 AC091178.2-201ENST00000584401 117 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 ZNF299P-201ENST00000406845 1804 ntBASIC0.73□□□□□ -2.29
SLIRPQ9GZT3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 U8.16-201ENST00000391279 133 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AL355796.1-201ENST00000406706 323 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 SNORA11.2-201ENST00000408318 127 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 USMG5P1-201ENST00000425964 177 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 MTND3P23-201ENST00000431980 347 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 MTND3P21-201ENST00000433774 331 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AC108210.2-201ENST00000503681 201 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AC022493.2-201ENST00000506122 481 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 RNU6-341P-201ENST00000516973 96 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 RNU7-172P-201ENST00000517125 64 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 MIR3684-201ENST00000579779 74 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 MIR4273-201ENST00000582824 84 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 MIR3942-201ENST00000585264 109 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AL357312.1-201ENST00000603879 298 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 AC024614.3-201ENST00000637860 256 ntBASIC0.72□□□□□ -2.29
SLIRPQ9GZT3 SNORD114-24-201ENST00000365029 72 ntBASIC0.71□□□□□ -2.3
SLIRPQ9GZT3 SNORA20B-201ENST00000384220 132 ntBASIC0.71□□□□□ -2.3
SLIRPQ9GZT3 RNU6-306P-201ENST00000384617 107 ntBASIC0.71□□□□□ -2.3
SLIRPQ9GZT3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.71□□□□□ -2.3
SLIRPQ9GZT3 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms