Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 U2.11-201ENST00000616345 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.2-201ENST00000616535 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.3-201ENST00000617785 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.19-201ENST00000618602 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 RNU2-1-201ENST00000618664 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 AC141273.2-201ENST00000618989 130 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.6-201ENST00000619225 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.5-201ENST00000619465 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.10-201ENST00000620268 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 AC006435.5-201ENST00000624486 112 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM55Q9BYV6 RNU6-407P-201ENST00000365280 104 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 RNU6-1289P-201ENST00000384431 106 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 CR769767.1-201ENST00000436337 346 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 AL135790.2-201ENST00000437701 267 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 RPS26P55-201ENST00000471178 356 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3□□□□□ -1.93
TRIM55Q9BYV6 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
TRIM55Q9BYV6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3□□□□□ -1.93
TRIM55Q9BYV6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
TRIM55Q9BYV6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 SNORD115-3-201ENST00000363100 82 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 RNU6-855P-201ENST00000410395 104 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 RNU6-651P-201ENST00000411040 105 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 AC011406.1-201ENST00000512440 370 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 AC008885.1-201ENST00000514930 301 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 RNA5SP20-201ENST00000515976 84 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 UBL5P2-201ENST00000583788 219 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 MIR7106-201ENST00000612419 65 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 AL442067.1-201ENST00000613261 223 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TRIM55Q9BYV6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 MIR1253-201ENST00000408273 105 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 AL353689.1-201ENST00000438895 199 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 Z98949.2-201ENST00000440996 144 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 RNU4-71P-201ENST00000516258 113 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 AC009127.3-201ENST00000570531 403 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 AL031274.2-201ENST00000599419 203 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 AC093732.2-201ENST00000607950 274 ntBASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM55Q9BYV6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RNU6-1272P-201ENST00000362776 107 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.76-201ENST00000362931 109 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.82-201ENST00000363000 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.92-201ENST00000363043 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 SNORA5B-201ENST00000363786 132 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.235-201ENST00000364412 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.306-201ENST00000365015 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.312-201ENST00000365089 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.322-201ENST00000365151 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 SNORD15B-201ENST00000384714 146 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 AL590004.2-201ENST00000404787 371 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.590-201ENST00000410140 107 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 HMGN2P34-201ENST00000437647 269 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RPS29P6-201ENST00000438196 145 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 AC107083.1-201ENST00000439643 279 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.650-201ENST00000459002 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RPS27AP9-201ENST00000477681 438 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RPS27P22-201ENST00000478056 241 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RNU6-826P-201ENST00000516827 104 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 RNA5SP137-201ENST00000516833 135 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.777-201ENST00000516982 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 SUMO2P18-201ENST00000518873 252 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.771-201ENST00000598668 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.789-201ENST00000622480 102 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 CENPCP1-201ENST00000533085 2578 ntBASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM55Q9BYV6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.122-201ENST00000363331 96 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 RNA5SP493-201ENST00000364115 91 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 RNY1-201ENST00000364228 113 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.515-201ENST00000384535 112 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 MIR29C-201ENST00000385231 88 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 RNU2-14P-201ENST00000411053 191 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 HSPE1P13-201ENST00000451143 297 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 AC010409.1-201ENST00000487382 476 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms