Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 FCF1P4-201ENST00000448326 183 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 AC112492.4-201ENST00000456549 352 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-856P-201ENST00000516959 98 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.711-201ENST00000516993 102 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 AC020661.2-201ENST00000560114 134 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 MIR5188-201ENST00000583467 113 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 snoZ196.1-201ENST00000625269 89 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.64□□□□□ -2.15
CCDC28BQ9BUN5 AC005592.1-201ENST00000566527 1640 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 MIR410-201ENST00000362222 80 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 RNU4-82P-201ENST00000362443 140 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.31-201ENST00000362574 102 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 SNORD87-201ENST00000364849 89 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-1264P-201ENST00000383891 107 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 MIR548B-201ENST00000385247 97 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 MRPL35P1-201ENST00000404272 572 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 AL078595.1-201ENST00000404458 226 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 SDAD1P3-201ENST00000427380 333 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 MTND1P14-201ENST00000427400 950 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 AC096644.2-201ENST00000429278 159 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 TOMM22P2-201ENST00000430735 237 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 RNU7-57P-201ENST00000459540 60 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 AL163540.1-201ENST00000485382 386 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 AK6P2-201ENST00000549020 471 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 SNORD58B-201ENST00000607313 66 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 AC007485.1-201ENST00000616755 206 ntBASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC28BQ9BUN5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.148-201ENST00000363557 117 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-418P-201ENST00000384035 107 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MIR1185-2-201ENST00000408687 86 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 ELOCP21-201ENST00000412558 336 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MTND2P29-201ENST00000438595 412 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-221P-201ENST00000459541 99 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 SNORA40.9-201ENST00000515895 93 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 AC018448.1-201ENST00000552843 316 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 AC110588.1-201ENST00000559699 137 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MIR3169-201ENST00000578032 83 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MIR3684-201ENST00000579779 74 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MIR4672-201ENST00000583126 81 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 MIR3171-201ENST00000584270 74 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 IGHVIII-44-202ENST00000636235 289 ntBASIC1.62□□□□□ -2.15
CCDC28BQ9BUN5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 SNORD115-3-201ENST00000363100 82 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-23P-201ENST00000363283 107 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.202-201ENST00000364083 110 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 SNORD114-6-201ENST00000364393 72 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 SNORA22B-201ENST00000383876 138 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.500-201ENST00000384466 111 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.510-201ENST00000384511 114 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-308P-201ENST00000390957 107 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 SNORA3.2-201ENST00000408221 125 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 MIR1283-2-201ENST00000408621 87 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AC008134.1-201ENST00000420943 193 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AL442663.2-201ENST00000554385 511 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 MIR4719-201ENST00000585233 84 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 RPS29P30-201ENST00000600975 111 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AL356055.1-201ENST00000602528 446 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AL357075.2-201ENST00000614906 189 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AC010205.1-201ENST00000616668 449 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AL590240.4-201ENST00000616908 390 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 AL590808.1-201ENST00000618696 141 ntBASIC1.61□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-694P-201ENST00000364071 147 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 RNU4-50P-201ENST00000364361 141 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 SNORD14.1-201ENST00000365609 90 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 RNU11-3P-201ENST00000391111 133 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 MRPL42P3-201ENST00000401492 326 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-57P-201ENST00000411348 103 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 BX510359.4-201ENST00000423750 193 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AC016717.1-201ENST00000448918 286 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 SNORA59A-201ENST00000459326 152 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 RNU6-625P-201ENST00000459412 107 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.713-201ENST00000517013 96 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 Y_RNA.721-201ENST00000517207 102 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AC022616.4-201ENST00000522985 181 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AL121655.1-201ENST00000605811 308 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AL353149.1-201ENST00000610667 244 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AC013412.1-201ENST00000610687 192 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 MIR6852-201ENST00000621699 66 ntBASIC1.6□□□□□ -2.15
CCDC28BQ9BUN5 AC022140.2-201ENST00000623500 188 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms