Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 Y_RNA.314-201ENST00000365114 102 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 RNU6-418P-201ENST00000384035 107 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 Y_RNA.463-201ENST00000384271 102 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 SNORA69.1-201ENST00000390904 137 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 RNA5SP504-201ENST00000410676 117 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AC114482.1-201ENST00000418010 247 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.88□□□□□ -2.11
RAD9AQ99638 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AC099799.1-201ENST00000439809 192 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AL357134.1-201ENST00000445848 426 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 RNA5SP445-201ENST00000515889 115 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 RNU7-4P-201ENST00000516961 62 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AP005660.1-201ENST00000522972 293 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.88□□□□□ -2.11
RAD9AQ99638 AC125232.2-201ENST00000592457 143 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 MZT1P2-201ENST00000604387 248 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 BX248123.2-201ENST00000606318 124 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AL078596.1-201ENST00000624856 447 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AC068205.3-201ENST00000636385 468 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 AC073544.1-201ENST00000600110 1595 ntBASIC1.88□□□□□ -2.11
RAD9AQ99638 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RAD9AQ99638 RNU6-879P-201ENST00000364328 108 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 Y_RNA.315-201ENST00000365117 102 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 Y_RNA.415-201ENST00000384012 112 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 RNU6-1001P-201ENST00000411265 100 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RAD9AQ99638 AC074290.1-201ENST00000448883 135 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 AC016717.1-201ENST00000448918 286 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.87□□□□□ -2.11
RAD9AQ99638 AC027575.1-201ENST00000481064 460 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 AC067942.3-201ENST00000512025 362 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 Y_RNA.683-201ENST00000516508 93 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 AC022868.1-201ENST00000517767 391 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 AC144568.1-201ENST00000520139 137 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 MTND5P35-201ENST00000557537 1720 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
RAD9AQ99638 AC008873.1-201ENST00000625051 138 ntBASIC1.87□□□□□ -2.11
RAD9AQ99638 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RAD9AQ99638 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RAD9AQ99638 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RAD9AQ99638 RNU6-1115P-201ENST00000362490 106 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 RNU6-797P-201ENST00000363101 109 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 SNORD87-201ENST00000364849 89 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 Y_RNA.419-201ENST00000384041 102 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 Y_RNA.431-201ENST00000384086 102 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 RNU6-975P-201ENST00000384296 105 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 MIR597-201ENST00000384968 97 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 Y_RNA.592-201ENST00000410274 109 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 Y_RNA.605-201ENST00000410577 105 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
RAD9AQ99638 RNU7-169P-201ENST00000459456 61 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 RPL36AP21-201ENST00000490372 323 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.86□□□□□ -2.11
RAD9AQ99638 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
RAD9AQ99638 AC005786.1-201ENST00000588553 154 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.86□□□□□ -2.11
RAD9AQ99638 AL050343.2-201ENST00000607338 280 ntBASIC1.86□□□□□ -2.11
RAD9AQ99638 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.86□□□□□ -2.11
RAD9AQ99638 RNA5SP361-201ENST00000362686 118 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 Y_RNA.122-201ENST00000363331 96 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 RNY3P11-201ENST00000364153 102 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 Y_RNA.428-201ENST00000384078 102 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 MIR329-1-201ENST00000385028 80 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.85□□□□□ -2.11
RAD9AQ99638 RNU7-57P-201ENST00000459540 60 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 RNU6-1170P-201ENST00000515974 106 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 SNORD116.3-201ENST00000517176 78 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 MIR2355-201ENST00000517199 87 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 AC091144.1-201ENST00000519573 138 ntBASIC1.85□□□□□ -2.11
RAD9AQ99638 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.85□□□□□ -2.11
RAD9AQ99638 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RAD9AQ99638 AL159152.1-201ENST00000635019 2587 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 RNU6-1145P-201ENST00000384246 107 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 RNU6-1235P-201ENST00000384559 107 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 MIR548B-201ENST00000385247 97 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 MTND4P28-201ENST00000426217 387 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 RNU6-498P-201ENST00000459468 107 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RAD9AQ99638 Y_RNA.661-201ENST00000516003 99 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 RNU6-976P-201ENST00000516086 111 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 RNU6-856P-201ENST00000516959 98 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 AK6P2-201ENST00000549020 471 ntBASIC1.84□□□□□ -2.11
RAD9AQ99638 MTND4P29-201ENST00000503122 1372 ntBASIC1.84□□□□□ -2.12
RAD9AQ99638 AC006026.1-201ENST00000444025 1803 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 AL391987.6-201ENST00000305671 199 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 Y_RNA.5-201ENST00000362334 102 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 U3.8-201ENST00000363675 217 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 Y_RNA.197-201ENST00000364004 102 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 RNU4-42P-201ENST00000364738 142 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 Y_RNA.327-201ENST00000365201 102 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 RNU6-318P-201ENST00000384283 103 ntBASIC1.83□□□□□ -2.12
RAD9AQ99638 Y_RNA.535-201ENST00000384612 99 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms