Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 RNU6-490P-201ENST00000362985 107 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 CALM2P4-201ENST00000430810 426 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 OR6C5P-201ENST00000452388 923 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 AC024995.1-201ENST00000523014 93 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-1.33□□□□□ -2.62
CFAP54Q96N23 RNU6-83P-201ENST00000384568 112 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.34□□□□□ -2.62
CFAP54Q96N23 SNORD31B-201ENST00000364977 69 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 RNU6-1226P-201ENST00000384317 107 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 RNU7-73P-201ENST00000458743 63 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.34□□□□□ -2.62
CFAP54Q96N23 MIR4778-201ENST00000577635 80 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AC022022.2-201ENST00000602989 360 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AL390123.1-201ENST00000603216 237 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.34□□□□□ -2.62
CFAP54Q96N23 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 MIR215-201ENST00000384858 110 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 AC023512.1-201ENST00000444513 499 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.34□□□□□ -2.62
CFAP54Q96N23 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.34□□□□□ -2.62
CFAP54Q96N23 SNORD24-201ENST00000383884 75 ntBASIC-1.35□□□□□ -2.63
CFAP54Q96N23 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.35□□□□□ -2.63
CFAP54Q96N23 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-1.35□□□□□ -2.63
CFAP54Q96N23 RNY4P37-201ENST00000516225 96 ntBASIC-1.35□□□□□ -2.63
CFAP54Q96N23 RNU6-778P-201ENST00000363269 103 ntBASIC-1.35□□□□□ -2.63
CFAP54Q96N23 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.35□□□□□ -2.63
CFAP54Q96N23 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.35□□□□□ -2.63
CFAP54Q96N23 MED28P2-201ENST00000475771 317 ntBASIC-1.35□□□□□ -2.63
CFAP54Q96N23 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
CFAP54Q96N23 RNU6-721P-201ENST00000410155 105 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 RNU2-23P-201ENST00000410545 195 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AC007919.1-201ENST00000429380 217 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AL031667.1-201ENST00000440222 725 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AC234772.3-201ENST00000602277 528 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 SNORD114-19-201ENST00000363072 75 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 MIR9-2-201ENST00000384838 87 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AL606923.1-201ENST00000406616 190 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 CDK8P2-201ENST00000415020 547 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.36□□□□□ -2.63
CFAP54Q96N23 RNU6-63P-201ENST00000516690 95 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AC008250.2-201ENST00000615261 205 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 BX322639.1-202ENST00000423987 2213 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
CFAP54Q96N23 MTND3P20-201ENST00000407663 186 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 RNU7-94P-201ENST00000459576 63 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 RNU6-469P-201ENST00000516253 101 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AC090617.3-201ENST00000573670 475 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AL117336.2-201ENST00000602435 335 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AC010975.3-201ENST00000618727 978 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AC104820.1-201ENST00000624183 307 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 AP002371.2-201ENST00000624450 503 ntBASIC-1.36□□□□□ -2.63
CFAP54Q96N23 MIR340-201ENST00000362125 95 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 SNORD18.2-201ENST00000459604 70 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 RNU6-319P-201ENST00000516025 108 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 LRRC6P1-201ENST00000532188 885 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 RNY1P11-201ENST00000363759 113 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 RNU6-975P-201ENST00000384296 105 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 AL392103.1-201ENST00000447000 198 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.37□□□□□ -2.63
CFAP54Q96N23 RNU2-53P-201ENST00000516257 147 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 AP003072.1-201ENST00000531740 145 ntBASIC-1.37□□□□□ -2.63
CFAP54Q96N23 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.37□□□□□ -2.63
CFAP54Q96N23 SNORA67.2-201ENST00000384300 149 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC022784.5-201ENST00000522241 437 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 MTCO3P15-201ENST00000526563 574 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC068587.4-201ENST00000533893 186 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC008521.1-201ENST00000587471 187 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC122133.1-201ENST00000613964 233 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 RNA5SP405-201ENST00000363059 114 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 RNU6-727P-201ENST00000363592 107 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 RNU6-613P-201ENST00000410412 108 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AC010154.1-201ENST00000425857 269 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 snoU13.14-201ENST00000459372 104 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 ZNF299P-201ENST00000406845 1804 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AL158053.1-201ENST00000441503 453 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 RNU7-102P-201ENST00000458948 62 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 RNU6-412P-201ENST00000516434 106 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.38□□□□□ -2.63
CFAP54Q96N23 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 MIR4676-201ENST00000583078 72 ntBASIC-1.38□□□□□ -2.63
CFAP54Q96N23 AL671309.1-201ENST00000603750 544 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms