Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SNORA26.7-201ENST00000391288 122 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 SNORA79-201ENST00000408376 140 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 RNA5SP293-201ENST00000410527 113 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 Y_RNA.622-201ENST00000411091 108 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 CYCSP19-201ENST00000411715 316 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 RNU6-426P-201ENST00000516464 97 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 MIR2276-201ENST00000516886 89 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.7□□□□□ -1.82
CALR3Q96L12 AC073413.2-201ENST00000604332 360 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 MIR338-201ENST00000636369 67 ntBASIC3.7□□□□□ -1.82
CALR3Q96L12 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CALR3Q96L12 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.7□□□□□ -1.82
CALR3Q96L12 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.7□□□□□ -1.82
CALR3Q96L12 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CALR3Q96L12 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.69□□□□□ -1.82
CALR3Q96L12 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.69□□□□□ -1.82
CALR3Q96L12 RNU6-199P-201ENST00000362954 107 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 SNORD45.3-201ENST00000363836 72 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 SNORD114-6-201ENST00000364393 72 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 RNU6-805P-201ENST00000365643 106 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 MIR513C-201ENST00000401352 84 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 ATP5A1P2-201ENST00000412323 255 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 AC104389.3-201ENST00000445629 235 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 SNRPGP8-201ENST00000454064 226 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 AC023449.1-201ENST00000454464 154 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 RNU6-1096P-201ENST00000517089 102 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.69□□□□□ -1.82
CALR3Q96L12 MIR6875-201ENST00000617506 72 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 MIR3658-201ENST00000636291 56 ntBASIC3.69□□□□□ -1.82
CALR3Q96L12 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
CALR3Q96L12 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.68□□□□□ -1.82
CALR3Q96L12 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CALR3Q96L12 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CALR3Q96L12 RNA5SP383-201ENST00000362934 120 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 RNU6-1180P-201ENST00000364935 107 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 SNORA73.2-201ENST00000364946 201 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 RNU6-1072P-201ENST00000384703 107 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 RNU6-443P-201ENST00000384780 107 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 RNU2-55P-201ENST00000411146 174 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 RN7SL636P-201ENST00000497504 294 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 RN7SKP282-201ENST00000516824 299 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 MIR5685-201ENST00000579080 79 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 AL359075.3-201ENST00000613288 217 ntBASIC3.68□□□□□ -1.82
CALR3Q96L12 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CALR3Q96L12 AC100821.1-201ENST00000523153 2479 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 Y_RNA.521-201ENST00000384560 114 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 SNORD37.2-201ENST00000391075 66 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 MIR1262-201ENST00000408276 93 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 RPL30P13-201ENST00000418873 348 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 RPS27P1-201ENST00000450552 247 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.67□□□□□ -1.82
CALR3Q96L12 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.67□□□□□ -1.82
CALR3Q96L12 RPL23AP91-201ENST00000569211 455 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 AL049861.1-201ENST00000603130 150 ntBASIC3.67□□□□□ -1.82
CALR3Q96L12 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CALR3Q96L12 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CALR3Q96L12 RNA5SP467-201ENST00000391274 118 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 RN7SKP284-201ENST00000411002 343 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 ATP5J2P3-201ENST00000451550 258 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 MIR3646-201ENST00000578301 84 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 MIR4506-201ENST00000584693 77 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 ZYXP1-201ENST00000617638 118 ntBASIC3.66□□□□□ -1.82
CALR3Q96L12 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CALR3Q96L12 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.66□□□□□ -1.82
CALR3Q96L12 Y_RNA.291-201ENST00000364886 113 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 Y_RNA.586-201ENST00000391146 98 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 RNU1-142P-201ENST00000516682 145 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 RNU7-128P-201ENST00000517247 62 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 AC104027.1-201ENST00000521887 300 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 AC007536.1-201ENST00000533382 349 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 AC112693.2-201ENST00000556538 232 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 AL031274.2-201ENST00000599419 203 ntBASIC3.65□□□□□ -1.83
CALR3Q96L12 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CALR3Q96L12 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CALR3Q96L12 SNORD9-201ENST00000362566 104 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 Y_RNA.796-201ENST00000364268 102 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 SNORA70.2-201ENST00000364506 135 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 Y_RNA.799-201ENST00000364992 102 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 Y_RNA.432-201ENST00000384087 111 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 RNU6-1117P-201ENST00000384525 104 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.64□□□□□ -1.83
CALR3Q96L12 CYCSP4-201ENST00000429682 331 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 AC018634.1-201ENST00000437554 401 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.64□□□□□ -1.83
CALR3Q96L12 SNORA25.12-201ENST00000516202 82 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 RNU6-1299P-201ENST00000516316 100 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 SNORA31.26-201ENST00000517250 137 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.64□□□□□ -1.83
CALR3Q96L12 PARP1P2-201ENST00000556806 195 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 AC007224.1-201ENST00000564410 144 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 MIR548AI-201ENST00000579940 88 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 uc_338.4-201ENST00000616635 176 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 MIR6844-201ENST00000637122 62 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CALR3Q96L12 AC010332.2-201ENST00000613083 1904 ntBASIC3.64□□□□□ -1.83
CALR3Q96L12 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CALR3Q96L12 RNU6-1209P-201ENST00000363655 107 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms