Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 HMGB3P3-201ENST00000510526 400 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 RNU6-1219P-201ENST00000516143 112 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 RNU6-436P-201ENST00000516171 114 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 AC079598.5-201ENST00000547460 117 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 AL008718.3-201ENST00000610217 321 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 AC104465.1-201ENST00000611365 139 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 AC016717.2-201ENST00000609089 5141 ntBASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PDLIM2Q96JY6 AC026241.1-201ENST00000517873 2142 ntBASIC2.65□□□□□ -1.98
PDLIM2Q96JY6 Y_RNA.8-201ENST00000362353 102 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.170-201ENST00000363746 110 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 RNU6-804P-201ENST00000384286 107 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 AL033523.1-201ENST00000605153 153 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PDLIM2Q96JY6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 RNU6-653P-201ENST00000363074 106 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 RNU1-105P-201ENST00000363470 161 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.435-201ENST00000384095 112 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 SNORA40.19-201ENST00000390846 128 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 SNORA12-201ENST00000391162 147 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 AL357139.1-201ENST00000407792 426 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 RNA5SP338-201ENST00000410495 85 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 RNA5SP504-201ENST00000410676 117 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 AC140059.1-201ENST00000489238 361 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 AC009127.3-201ENST00000570531 403 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 MIR5692C2-201ENST00000577959 77 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 AL670379.2-201ENST00000604983 252 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 MIR7106-201ENST00000612419 65 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
PDLIM2Q96JY6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 RNA5SP354-201ENST00000391247 136 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 AC097463.2-201ENST00000421074 142 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.637-201ENST00000459424 114 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 RNU6-346P-201ENST00000516288 111 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 MIR3144-201ENST00000579460 79 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM2Q96JY6 RNA5SP37-201ENST00000365420 130 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 RNU6-763P-201ENST00000390865 106 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 MTCO2P33-201ENST00000402100 465 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 AL031003.1-201ENST00000404229 172 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 MIR1289-1-201ENST00000408836 144 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 RNU6-394P-201ENST00000410735 107 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 RPS27P26-201ENST00000494583 239 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 AC090255.1-201ENST00000495779 349 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 RNU7-200P-201ENST00000516105 62 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 MTND5P41-201ENST00000517498 206 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 MIR5694-201ENST00000581190 76 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 MIR6895-201ENST00000613497 78 ntBASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM2Q96JY6 AL359854.1-201ENST00000614203 1594 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 MAPK10-266ENST00000641066 6555 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AC138915.1-201ENST00000565427 1685 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 MIRLET7G-201ENST00000362280 84 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 SNORD115-30-201ENST00000364117 82 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 RNU6-301P-201ENST00000384277 107 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 SNORA67.2-201ENST00000384300 149 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.571-201ENST00000384753 98 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 RNU6-1135P-201ENST00000411083 103 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 EIF4EP4-201ENST00000424916 578 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AC009414.1-201ENST00000427200 443 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 TOMM22P2-201ENST00000430735 237 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 U8.19-201ENST00000459095 133 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AP001486.1-201ENST00000463339 476 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 MIR5002-201ENST00000584713 97 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 MIR4765-201ENST00000585007 77 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AC008739.2-201ENST00000597006 317 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 RPL30P11-203ENST00000598995 310 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 U4.3-201ENST00000621047 82 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AC002064.3-201ENST00000623448 346 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 AC132825.6-201ENST00000638861 357 ntBASIC2.61□□□□□ -1.99
PDLIM2Q96JY6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms