| TMEM41A | Q96HV5 | RPL23AP94-201 | ENST00000512518 | 302 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| TMEM41A | Q96HV5 | AC104695.3-201 | ENST00000604052 | 296 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| TMEM41A | Q96HV5 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| TMEM41A | Q96HV5 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| TMEM41A | Q96HV5 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-454P-201 | ENST00000364292 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-450P-201 | ENST00000364654 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.287-201 | ENST00000364853 | 94 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-823P-201 | ENST00000391042 | 103 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MAMDC2-AS1-203 | ENST00000420573 | 339 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RPL23AP6-201 | ENST00000446637 | 472 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SUMO1P2-201 | ENST00000452524 | 304 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RPS27P22-201 | ENST00000478056 | 241 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL442663.2-201 | ENST00000554385 | 511 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC008749.1-201 | ENST00000597650 | 306 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC005034.5-201 | ENST00000604219 | 466 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC040896.1-201 | ENST00000613819 | 479 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MGAT4C-207 | ENST00000552808 | 1937 nt | APPRIS P1 TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORA63-201 | ENST00000363450 | 132 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-1019P-201 | ENST00000364424 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORA33.2-201 | ENST00000365413 | 134 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-639P-201 | ENST00000384074 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU5A-5P-201 | ENST00000411054 | 116 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL035415.1-201 | ENST00000447150 | 289 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.715-201 | ENST00000517082 | 110 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL035078.1-202 | ENST00000531627 | 413 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC090398.1-202 | ENST00000580403 | 457 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR4435-1-201 | ENST00000582552 | 80 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | U6.115-201 | ENST00000636045 | 103 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SIRT1-203 | ENST00000406900 | 3295 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SAGE1-202 | ENST00000370709 | 2879 nt | APPRIS P2 TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-271P-201 | ENST00000363858 | 105 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORA20B-201 | ENST00000384220 | 132 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORA8-201 | ENST00000384574 | 139 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-1186P-201 | ENST00000410429 | 97 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL390729.2-201 | ENST00000416137 | 156 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC018634.1-201 | ENST00000437554 | 401 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC005002.2-201 | ENST00000438228 | 269 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC021269.2-201 | ENST00000532318 | 330 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SUB1P4-201 | ENST00000566062 | 339 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC055872.1-201 | ENST00000570978 | 278 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AP001178.1-201 | ENST00000584679 | 268 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | ARHGAP5-202 | ENST00000345122 | 9604 nt | APPRIS P3 TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SLCO1B3-202 | ENST00000381545 | 2805 nt | APPRIS P1 TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | NEDD4-205 | ENST00000506154 | 6751 nt | TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MTND5P6-201 | ENST00000422338 | 1798 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.380-201 | ENST00000365663 | 111 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.455-201 | ENST00000384230 | 98 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.462-201 | ENST00000384268 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL355796.1-201 | ENST00000406706 | 323 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR1252-201 | ENST00000408861 | 65 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU2-54P-201 | ENST00000410299 | 190 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU2-12P-201 | ENST00000517216 | 168 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC024995.1-201 | ENST00000523014 | 93 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AP003072.1-201 | ENST00000531740 | 145 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC023157.2-201 | ENST00000540596 | 141 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | LINC01533-205 | ENST00000593056 | 607 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC104819.3-201 | ENST00000603264 | 540 nt | TSL 4 BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC067747.1-201 | ENST00000608026 | 250 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC010615.1-201 | ENST00000594254 | 1764 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.101-201 | ENST00000363154 | 102 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.143-201 | ENST00000363520 | 106 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-1175P-201 | ENST00000365200 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-407P-201 | ENST00000365280 | 104 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | XGY1-201 | ENST00000381172 | 446 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.422-201 | ENST00000384054 | 114 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.527-201 | ENST00000384573 | 102 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | EBAG9P1-201 | ENST00000418955 | 543 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-155P-201 | ENST00000516347 | 100 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC084364.2-201 | ENST00000546924 | 395 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR4680-201 | ENST00000580906 | 66 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC011373.1-201 | ENST00000607270 | 237 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | U6.73-201 | ENST00000619194 | 103 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | 2.16 | □□□□□ -2.06 | | |