Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 AC010525.2-201ENST00000590920 195 ntBASIC0.74□□□□□ -2.29
SNF8Q96H20 AC022432.1-201ENST00000595739 310 ntBASIC0.74□□□□□ -2.29
SNF8Q96H20 AC080078.2-201ENST00000603766 501 ntBASIC0.74□□□□□ -2.29
SNF8Q96H20 AC009248.2-201ENST00000619826 254 ntBASIC0.74□□□□□ -2.29
SNF8Q96H20 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 SNORD115-32-201ENST00000364079 82 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 Y_RNA.363-201ENST00000365529 113 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 RNU6-128P-201ENST00000383976 107 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 MIR153-2-201ENST00000385225 87 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 SNORD41-201ENST00000386967 70 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 SNORD65B-201ENST00000459126 73 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.73□□□□□ -2.29
SNF8Q96H20 Y_RNA.665-201ENST00000516177 98 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 Y_RNA.704-201ENST00000516851 102 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 AL512360.1-201ENST00000555346 234 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 POLR3GP2-201ENST00000588366 668 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.73□□□□□ -2.29
SNF8Q96H20 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
SNF8Q96H20 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6-137P-201ENST00000363680 108 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 SNORD114-22-201ENST00000365423 72 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6-259P-201ENST00000383999 107 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6-159P-201ENST00000391080 106 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6-1054P-201ENST00000411293 104 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.72□□□□□ -2.29
SNF8Q96H20 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.72□□□□□ -2.29
SNF8Q96H20 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.72□□□□□ -2.29
SNF8Q96H20 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.72□□□□□ -2.29
SNF8Q96H20 NDUFA5P4-201ENST00000436704 385 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 NDUFB4P10-201ENST00000452541 359 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC010486.3-201ENST00000511602 785 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 Y_RNA.693-201ENST00000516641 110 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNA5SP168-201ENST00000516642 112 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6-1198P-201ENST00000516904 67 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 MIR4438-201ENST00000585271 93 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 FAM106DP-201ENST00000586416 501 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC010620.1-201ENST00000601088 1102 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 MIR6504-201ENST00000613520 61 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC124864.2-201ENST00000624736 186 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 AC068137.3-201ENST00000639191 341 ntBASIC0.72□□□□□ -2.29
SNF8Q96H20 RNU6-1266P-201ENST00000362794 105 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 Y_RNA.124-201ENST00000363339 93 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 RNU6-793P-201ENST00000384233 104 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 RNU6-541P-201ENST00000384709 110 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 MIR19B1-201ENST00000384829 87 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 MIR517A-201ENST00000385001 87 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 RNU2-66P-201ENST00000410650 161 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 CALM2P4-201ENST00000430810 426 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AC245047.7-201ENST00000440265 293 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 MTND4P18-201ENST00000447010 465 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AC093850.1-201ENST00000454121 251 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.71□□□□□ -2.3
SNF8Q96H20 RNU6-917P-201ENST00000516294 104 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AC091144.1-201ENST00000519573 138 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.71□□□□□ -2.3
SNF8Q96H20 GHRLOS.1-201ENST00000610995 70 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AL138726.1-201ENST00000614873 333 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 AL359880.1-201ENST00000621879 266 ntBASIC0.71□□□□□ -2.3
SNF8Q96H20 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.71□□□□□ -2.3
SNF8Q96H20 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.71□□□□□ -2.3
SNF8Q96H20 RNU6-483P-201ENST00000384088 108 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 AC063976.4-201ENST00000421971 163 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 MTCO3P18-201ENST00000440206 761 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 MRPS10P1-201ENST00000448483 130 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.7□□□□□ -2.3
SNF8Q96H20 RPS27P22-201ENST00000478056 241 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.7□□□□□ -2.3
SNF8Q96H20 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 AC010469.2-201ENST00000496412 480 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 RNU6-405P-201ENST00000516637 110 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 AC136628.3-201ENST00000521868 290 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 AL162424.1-201ENST00000602325 221 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 Z99129.1-201ENST00000612510 255 ntBASIC0.7□□□□□ -2.3
SNF8Q96H20 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SNF8Q96H20 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SNF8Q96H20 RNU6-199P-201ENST00000362954 107 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 Y_RNA.179-201ENST00000363844 90 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 RNU6-1042P-201ENST00000384204 107 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 RNU6-17P-201ENST00000384245 107 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 RNU6-18P-201ENST00000384527 107 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 U8.16-201ENST00000391279 133 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 AF228730.1-201ENST00000397972 663 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 RNU7-94P-201ENST00000459576 63 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 SNORD79.1-201ENST00000516069 84 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.69□□□□□ -2.3
SNF8Q96H20 AC019193.3-201ENST00000609144 554 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
SNF8Q96H20 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.69□□□□□ -2.3
SNF8Q96H20 MIR6079-201ENST00000635807 62 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms