Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.135-201ENST00000363439 95 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 RNU6-259P-201ENST00000383999 107 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.415-201ENST00000384012 112 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 SNORD41-201ENST00000386967 70 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 RNU2-66P-201ENST00000410650 161 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 RNU7-94P-201ENST00000459576 63 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 AC091179.3-201ENST00000474761 144 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 SNORA31.2-201ENST00000516019 134 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 PIGPP4-201ENST00000584447 307 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 AL138726.1-201ENST00000614873 333 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 SNORD3E-202ENST00000627253 216 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 RNU6-908P-201ENST00000410160 94 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 PCMTD1P1-201ENST00000455560 355 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 SNORD65B-201ENST00000459126 73 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 RPL30P10-201ENST00000488148 337 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC019235.1-201ENST00000503847 207 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 SNORA31.4-201ENST00000516049 129 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC011604.1-201ENST00000545978 196 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 MIR5696-201ENST00000578474 85 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 MTND1P15-201ENST00000579262 949 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC009248.2-201ENST00000619826 254 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC006435.5-201ENST00000624486 112 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 AC018630.2-201ENST00000534866 2403 ntBASIC0.83□□□□□ -2.28
ECHDC3Q96DC8 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 RNU6-42P-201ENST00000384165 107 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 AC245047.7-201ENST00000440265 293 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 MTND4P18-201ENST00000447010 465 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 TRBVA-201ENST00000498804 316 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 AC105758.1-201ENST00000506038 399 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 AC093303.1-201ENST00000514549 295 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 RNU6-922P-201ENST00000516753 99 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 MIR3611-201ENST00000584484 83 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 AC010525.2-201ENST00000590920 195 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 AC099654.12-201ENST00000639868 649 ntBASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
ECHDC3Q96DC8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC068700.1-201ENST00000565862 3754 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 RNU6-793P-201ENST00000384233 104 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 RNU6-790P-201ENST00000384479 105 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 RNU6-910P-201ENST00000390844 107 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AL590632.1-201ENST00000424289 371 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 SEPT14P3-201ENST00000439401 183 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 MTCO3P18-201ENST00000440206 761 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AL732372.2-207ENST00000445840 183 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 SEPT14P2-201ENST00000453405 183 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 HMGN2P26-201ENST00000463169 339 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 SEPT14P4-201ENST00000513445 186 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 SNORD79.1-201ENST00000516069 84 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 FO082796.1-201ENST00000523795 183 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC090049.2-201ENST00000550377 109 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AL512360.1-201ENST00000555346 234 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 UBL5P4-201ENST00000562584 236 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 POLR3GP2-201ENST00000588366 668 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC108706.1-201ENST00000611053 297 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 Z99129.1-201ENST00000612510 255 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC106754.2-201ENST00000623006 233 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 AC068137.4-201ENST00000638485 296 ntBASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
ECHDC3Q96DC8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 RNU6-199P-201ENST00000362954 107 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 RNU6-280P-201ENST00000364145 104 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 Y_RNA.256-201ENST00000364594 104 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 SNORD116-9-201ENST00000384000 95 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 SNORD116-3-201ENST00000384287 95 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 SNORD116-7-201ENST00000384404 95 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 SNORD116-5-201ENST00000384462 95 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 Y_RNA.615-201ENST00000410769 117 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 AC114482.1-201ENST00000418010 247 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 AC243428.1-201ENST00000421099 264 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 AC002429.1-201ENST00000437672 148 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 MRPS10P1-201ENST00000448483 130 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms