Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-991P-201ENST00000516168 107 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 RNU6-436P-201ENST00000516171 114 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 SNORA27.4-201ENST00000516650 95 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 AC013412.1-201ENST00000610687 192 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 U6.115-201ENST00000636045 103 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CTHRC1Q96CG8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AL136360.1-201ENST00000503377 1900 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.277-201ENST00000364754 102 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.329-201ENST00000365209 107 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 SNORD14D-201ENST00000384390 87 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 RNU6-710P-201ENST00000410424 105 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 RNU2-48P-201ENST00000410694 191 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC009487.2-201ENST00000420969 6821 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 MTCO1P5-201ENST00000433573 344 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC016717.1-201ENST00000448918 286 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 SNORA70.12-201ENST00000516084 153 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 RNU6-966P-201ENST00000516479 104 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC004486.1-201ENST00000546846 233 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC010900.2-201ENST00000604508 210 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC078938.1-201ENST00000620993 318 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AC093010.3-201ENST00000570269 15214 ntBASIC2.38□□□□□ -2.03
CTHRC1Q96CG8 AP006437.1-201ENST00000641440 3685 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.65-201ENST00000362846 100 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 SNORD115-30-201ENST00000364117 82 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.418-201ENST00000384029 102 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 MIR196B-201ENST00000384852 84 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 MIR27B-201ENST00000385129 97 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 AL031003.1-201ENST00000404229 172 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 AC008134.1-201ENST00000420943 193 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 AL357134.1-201ENST00000445848 426 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 RNU6-111P-201ENST00000517179 105 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 PRELID2P1-201ENST00000552837 301 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 DEFB117-201ENST00000602356 141 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CTHRC1Q96CG8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 UBE2WP1-201ENST00000362030 340 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RNU6-338P-201ENST00000383888 105 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 SUMO1P4-201ENST00000429430 302 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 AC091959.1-201ENST00000495857 238 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 AC010598.1-201ENST00000510378 103 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RPL23AP94-201ENST00000512518 302 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 MIR3670-2-201ENST00000582974 65 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 MIR3670-1-201ENST00000584160 65 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 MIR3670-3-201ENST00000584855 65 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 AL162424.1-201ENST00000602325 221 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 MIR3670-4-201ENST00000612260 65 ntBASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CTHRC1Q96CG8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 SNORD114-7-201ENST00000362520 77 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 RNU4-80P-201ENST00000363200 141 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 RNA5SP68-201ENST00000363885 119 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 PRELID3BP1-201ENST00000457142 540 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 RNU4-71P-201ENST00000516258 113 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 RNU6-191P-201ENST00000516295 94 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.679-201ENST00000516416 91 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 RPL21P9-201ENST00000556149 474 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 MIR3145-201ENST00000580727 82 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CTHRC1Q96CG8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 MIR449A-201ENST00000362113 91 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 RNU6-271P-201ENST00000363858 105 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.275-201ENST00000364726 110 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.539-201ENST00000384635 107 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 Y_RNA.590-201ENST00000410140 107 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 EDDM3CP-201ENST00000415977 425 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms