Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC016717.1-201ENST00000448918 286 ntBASIC3.34□□□□□ -1.87
ZNF428Q96B54 TRBV12-1-201ENST00000479785 344 ntBASIC3.34□□□□□ -1.87
ZNF428Q96B54 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF428Q96B54 RNU6-897P-201ENST00000517135 105 ntBASIC3.34□□□□□ -1.87
ZNF428Q96B54 MYL12BP1-201ENST00000569826 507 ntBASIC3.34□□□□□ -1.87
ZNF428Q96B54 SNORD14A-201ENST00000606526 91 ntBASIC3.34□□□□□ -1.87
ZNF428Q96B54 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF428Q96B54 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF428Q96B54 MIR340-201ENST00000362125 95 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 RNU6-770P-201ENST00000363929 105 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 Y_RNA.214-201ENST00000364201 112 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 SNORD115-46-201ENST00000390982 71 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 RNU6-1248P-201ENST00000391096 64 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 RNA5SP508-201ENST00000411327 119 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.33□□□□□ -1.88
ZNF428Q96B54 AC024067.1-201ENST00000426199 223 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF428Q96B54 MTND1P19-201ENST00000511780 315 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF428Q96B54 AC004467.1-201ENST00000615678 330 ntBASIC3.33□□□□□ -1.88
ZNF428Q96B54 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF428Q96B54 Y_RNA.149-201ENST00000363558 117 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 RNU6-961P-201ENST00000363893 105 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 RNA5SP493-201ENST00000364115 91 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 Y_RNA.483-201ENST00000384380 101 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 RNA5SP210-201ENST00000391034 120 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 OOSP1P1-201ENST00000423265 274 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 ATP5J2P3-201ENST00000451550 258 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF428Q96B54 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 RNU2-12P-201ENST00000517216 168 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 MIR376A1-201ENST00000616574 68 ntBASIC3.32□□□□□ -1.88
ZNF428Q96B54 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ZNF428Q96B54 Y_RNA.176-201ENST00000363815 109 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 Y_RNA.307-201ENST00000365022 117 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 MIR1253-201ENST00000408273 105 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 RNU6-710P-201ENST00000410424 105 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 RPL21P38-201ENST00000418090 167 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 CST2P1-201ENST00000425770 87 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF428Q96B54 AC098869.1-201ENST00000481627 292 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 RNA5SP320-201ENST00000516263 124 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 SNORA31.25-201ENST00000517242 134 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 AC024995.1-201ENST00000523014 93 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 AL137100.2-201ENST00000555786 315 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 MIR3169-201ENST00000578032 83 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 AL590240.4-201ENST00000616908 390 ntBASIC3.31□□□□□ -1.88
ZNF428Q96B54 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF428Q96B54 CENPCP1-201ENST00000533085 2578 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 Y_RNA.361-201ENST00000365515 120 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 Y_RNA.556-201ENST00000384677 113 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 RNU6-21P-201ENST00000384710 107 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ZNF428Q96B54 CR769767.1-201ENST00000436337 346 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 AC069257.2-201ENST00000441819 155 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 RPL39P40-201ENST00000445481 146 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 AC011406.1-201ENST00000512440 370 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF428Q96B54 Y_RNA.668-201ENST00000516233 93 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 AL161670.1-201ENST00000554348 137 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 AC011476.5-201ENST00000615594 130 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 U4.1-201ENST00000620349 87 ntBASIC3.3□□□□□ -1.88
ZNF428Q96B54 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ZNF428Q96B54 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF428Q96B54 RNA5SP456-201ENST00000364002 114 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 RNU6-1175P-201ENST00000365200 107 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 RNU6-713P-201ENST00000384761 107 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 MIR27B-201ENST00000385129 97 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 AL513328.1-201ENST00000446460 224 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.15-201ENST00000611544 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.16-201ENST00000613119 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.12-201ENST00000613778 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.20-201ENST00000613956 192 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.9-201ENST00000615427 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.11-201ENST00000616345 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.2-201ENST00000616535 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.3-201ENST00000617785 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.19-201ENST00000618602 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 RNU2-1-201ENST00000618664 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.6-201ENST00000619225 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.5-201ENST00000619465 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 U2.10-201ENST00000620268 191 ntBASIC3.29□□□□□ -1.88
ZNF428Q96B54 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF428Q96B54 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF428Q96B54 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF428Q96B54 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF428Q96B54 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF428Q96B54 snoU2-30.2-201ENST00000362805 70 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 SNORD81.1-201ENST00000363064 77 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 RNU6-702P-201ENST00000364982 107 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 RNU6-1318P-201ENST00000365389 103 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 MIR1302-3-201ENST00000408128 138 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 MIR1261-201ENST00000408659 82 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF428Q96B54 AC096920.1-201ENST00000423991 241 ntBASIC3.28□□□□□ -1.88
ZNF428Q96B54 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF428Q96B54 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF428Q96B54 RNU4-90P-201ENST00000362773 141 ntBASIC3.27□□□□□ -1.89
ZNF428Q96B54 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms